MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-144

Family name MIR-144 (all species)
Species Human (Homo sapiens)
MiRBase ID hsa-mir-144
Paralogues
Orthologues Aca-Mir-144-v1  Ami-Mir-144  Bta-Mir-144-v1  Cfa-Mir-144-v1  Cja-Mir-144-v1  Cli-Mir-144-v1  Cmi-Mir-144  Cpi-Mir-144  Cpo-Mir-144-v1  Dno-Mir-144  Dre-Mir-144-v1  Ebu-Mir-144-v1  Eca-Mir-144-v1  Ete-Mir-144  Gga-Mir-144  Gja-Mir-144-v1  Gmo-Mir-144-v1  Laf-Mir-144  Lch-Mir-144  Loc-Mir-144-v1  Mal-Mir-144-v1  Mdo-Mir-144  Mml-Mir-144  Mmr-Mir-144  Mmu-Mir-144-v1  Mun-Mir-144-v1  Neu-Mir-144-v1  Oan-Mir-144  Ocu-Mir-144-v1  Pab-Mir-144-v1  Pbv-Mir-144  Pma-Mir-144  Rno-Mir-144-v1  Sha-Mir-144  Spt-Mir-144  Sto-Mir-144  Tgu-Mir-144-v1  Tni-Mir-144  Xtr-Mir-144 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(hg38)		 chr17: 28861547-28861604 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-144-v1)		 Mir-451 chr17: 28861383-28861424 [-] UCSC Ensembl
Mir-144-v1 chr17: 28861547-28861604 [-] UCSC Ensembl
Mir-144-v2 chr17: 28861547-28861604 [-] UCSC Ensembl
Variant

Hsa-Mir-144-v1
Seed ACAGUAU
Precursor
(pre-Mir +30nt flank)		 
CUUCCUGUGCCCCCAGUGGGGCCCUGGCUGGGAUAUCAUCAUAUACUGUAAGUUUGCGAUGAGACACUACAGUAUAGAUGAUGUACUAGUCCGGGCACCCCCAGCUCUGGAGCCUGAC
Get precursor sequence
Structure
        10         20         30        40        50         
CUUCCUGUGCCCCCAGU-   -|   U      G        A         AGUUUGCG 
                  GGG GCCC GGCUGG AUAUCAUC UAUACUGUA        \
                  CCC CGGG CUGAUC UGUAGUAG AUAUGACAU        A
CAGUCCGAGGUCUCGACC   A^   C      A        -         CACAGAGU 
      110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-144-v1_5p*
mirBase accessionMIMAT0004600
Sequence 
0- GGAUAUCAUCAUAUACUGUAAG -22
Get sequence
Proposed targets microrna.org: MIMAT0004600
TargetScanVert: hsa-miR-144-5p
TargetMiner: hsa-miR-144-5p
miRDB: MIMAT0004600
Mature sequence

Hsa-Mir-144-v1_3p
mirBase accessionMIMAT0000436
Sequence 
37- UACAGUAUAGAUGAUGUACUA -58
Get sequence
Proposed targets microrna.org: MIMAT0000436
TargetScanVert: hsa-miR-144-3p
TargetMiner: hsa-miR-144-3p
miRDB: MIMAT0000436
Variant

Hsa-Mir-144-v2
Seed UACAGUA
Precursor
(pre-Mir +30nt flank)		 
CUUCCUGUGCCCCCAGUGGGGCCCUGGCUGGGAUAUCAUCAUAUACUGUAAGUUUGCGAUGAGACACUACAGUAUAGAUGAUGUACUAGUCCGGGCACCCCCAGCUCUGGAGCCUGAC
Get precursor sequence
Structure
        10         20         30        40        50         
CUUCCUGUGCCCCCAGU-   -|   U      G        A         A  UUGCG 
                  GGG GCCC GGCUGG AUAUCAUC UAUACUGUA GU     A
                  CCC CGGG CUGAUC UGUAGUAG AUAUGACAU CA     U
CAGUCCGAGGUCUCGACC   A^   C      A        -         -  CAGAG 
      110       100        90        80         70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-144-v2_5p*
mirBase accessionMIMAT0004600
Sequence 
0- GGAUAUCAUCAUAUACUGUAAGU -23
Get sequence
Proposed targets microrna.org: MIMAT0004600
TargetScanVert: hsa-miR-144-5p
TargetMiner: hsa-miR-144-5p
miRDB: MIMAT0004600
Mature sequence

Hsa-Mir-144-v2_3p
mirBase accessionMIMAT0000436
Sequence 
36- CUACAGUAUAGAUGAUGUACUA -58
Get sequence
Proposed targets microrna.org: MIMAT0000436
TargetScanVert: hsa-miR-144-3p
TargetMiner: hsa-miR-144-3p
miRDB: MIMAT0000436