MirGeneDB 2.1
MirGeneDB ID

Pbv-Mir-30-P2b

Family name MIR-30 (all species)
Seed GUAAACA
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-30c-1
Paralogues Pbv-Mir-30-P1a  Pbv-Mir-30-P1b  Pbv-Mir-30-P1d  Pbv-Mir-30-P2a  Pbv-Mir-30-P2d 
Orthologues Aca-Mir-30-P2b  Ami-Mir-30-P2b  Bta-Mir-30-P2b  Cfa-Mir-30-P2b  Cli-Mir-30-P2b  Cmi-Mir-30-P2b  Cpi-Mir-30-P2b  Cpo-Mir-30-P2b  Dno-Mir-30-P2b  Dre-Mir-30-P2b  Ete-Mir-30-P2b  Gga-Mir-30-P2b  Gja-Mir-30-P2b  Gmo-Mir-30-P2b  Hsa-Mir-30-P2b  Lch-Mir-30-P2b  Loc-Mir-30-P2b  Mal-Mir-30-P2b  Mdo-Mir-30-P2b  Mml-Mir-30-P2b  Mmu-Mir-30-P2b  Mun-Mir-30-P2b  Oan-Mir-30-P2b  Ocu-Mir-30-P2b  Rno-Mir-30-P2b  Sha-Mir-30-P2b  Spt-Mir-30-P2b  Sto-Mir-30-P2b  Tgu-Mir-30-P2b  Tni-Mir-30-P2b  Xla-Mir-30-P2b1  Xla-Mir-30-P2b2  Xtr-Mir-30-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE957005.1: 55738-55801 [+]
Clustered miRNAs
(< 50kb from Mir-30-P2b)		 Mir-30-P1b KE957005.1: 35883-35946 [+]
Mir-30-P2b KE957005.1: 55738-55801 [+]
Precursor
(pre-Mir +30nt flank)
UGAUCCGGAAUAAAUCCAAGUGACAGAGGGUGUAAACAUCCUACACUCUCAGCUGUGUGGAAAAGAAGAAAGCUGGGAGAAGGCUGUUUACUCUCUCUGCAUUGGAAAACAGCUGAAGGUGGGA
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Structure
        10           20        30        40        50        60  
UGAUCCGGAAUAAAUCCA---|   A       U       U   ACA         GUGUGGA 
                     AGUG CAGAGGG GUAAACA CCU   CUCUCAGCU       A
                     UUAC GUCUCUC CAUUUGU GGA   GAGGGUCGA       A
AGGGUGGAAGUCGACAAAAGG^   -       U       C   A--         AAGAAGA 
  120       110       100         90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Pbv-Mir-30-P2b_5p
mirBase accessionMIMAT0038873
Sequence 
0- UGUAAACAUCCUACACUCUCAGCU -24
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Star sequence

Pbv-Mir-30-P2b_3p*
mirBase accessionMIMAT0038874
Sequence 
42- CUGGGAGAAGGCUGUUUACUCU -64
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