MirGeneDB 2.1
MirGeneDB ID

Pbv-Mir-10-P3d

Family name MIR-10 (all species)
Seed CCCUGAG
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-125b-1
Paralogues Pbv-Mir-10-P1b-v1  Pbv-Mir-10-P1b-v2  Pbv-Mir-10-P1c-v1  Pbv-Mir-10-P1c-v2  Pbv-Mir-10-P1d-v1  Pbv-Mir-10-P1d-v2  Pbv-Mir-10-P2b  Pbv-Mir-10-P2c  Pbv-Mir-10-P2d  Pbv-Mir-10-P3b  Pbv-Mir-10-P3c 
Orthologues Aae-Mir-10-P3  Aca-Mir-10-P3d  Ami-Mir-10-P3d  Asu-Mir-10-P3  Bfl-Mir-10-P3  Bge-Mir-10-P3  Bla-Mir-10-P3  Bpl-Mir-10-P3  Bta-Mir-10-P3d  Cfa-Mir-10-P3d  Cgi-Mir-10-P3  Cin-Mir-10-P3  Cli-Mir-10-P3d  Cmi-Mir-10-P3d  Cpi-Mir-10-P3d  Cpo-Mir-10-P3d  Cte-Mir-10-P3  Dan-Mir-10-P3  Dma-Mir-10-P3  Dme-Mir-10-P3  Dmo-Mir-10-P3  Dno-Mir-10-P3d  Dpu-Mir-10-P3  Dre-Mir-10-P3d1  Dre-Mir-10-P3d2  Dsi-Mir-10-P3  Dya-Mir-10-P3  Esc-Mir-10-P3  Ete-Mir-10-P3d  Gga-Mir-10-P3d  Gja-Mir-10-P3d  Gmo-Mir-10-P3d1  Gmo-Mir-10-P3d2  Hsa-Mir-10-P3d  Isc-Mir-10-P3  Lan-Mir-10-P3  Lch-Mir-10-P3d  Lgi-Mir-10-P3  Loc-Mir-10-P3d  Mal-Mir-10-P3d1  Mal-Mir-10-P3d2  Mdo-Mir-10-P3d  Mml-Mir-10-P3d  Mmu-Mir-10-P3d  Mun-Mir-10-P3d  Nve-Mir-10  Oan-Mir-10-P3d  Obi-Mir-10-P3  Ocu-Mir-10-P3d  Ovu-Mir-10-P3  Pmi-Mir-10-P3  Rno-Mir-10-P3d  Sha-Mir-10-P3d  Sko-Mir-10-P3  Spt-Mir-10-P3d  Spu-Mir-10-P3  Sto-Mir-10-P3d  Tca-Mir-10-P3  Tgu-Mir-10-P3d  Tni-Mir-10-P3d1  Tni-Mir-10-P3d2  Xbo-Mir-10-P3  Xla-Mir-10-P3d3  Xla-Mir-10-P3d4  Xtr-Mir-10-P3d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Eumetazoa
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE954744.1: 197632-197693 [-]
Clustered miRNAs
(< 50kb from Mir-10-P3d)		 Mir-10-P3d KE954744.1: 197632-197693 [-]
Let-7-P1d KE954744.1: 228122-228188 [-]
Precursor
(pre-Mir +30nt flank)
GUGAGAAAUCAUUGAAUGCGCCCCUCUCUGUCCCUGAGACCCUAACUUGUGACGUUUUGGUUUCAAGUCCACGGGUUAGGCUCUCGGGAGCUGUGAGUUGUGCCACUGCAUCCUUCUCCAAU
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Structure
        10          20        30        40        50        60
GUGAGAAAUCAUUGAAU--|   CC   UCU UC       C           ACGUUUUG 
                   GCGC  CUC   G  CCUGAGA CCUAACUUGUG        G
                   CGUG  GAG   C  GGGCUCU GGAUUGGGCAC        U
UAACCUCUUCCUACGUCAC^   UU   UGU GA       C           CUGAACUU 
120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
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To
Mature sequence

Pbv-Mir-10-P3d_5p
mirBase accessionMIMAT0038916
Sequence 
0- UCCCUGAGACCCUAACUUGUGA -22
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Star sequence

Pbv-Mir-10-P3d_3p* (predicted)
mirBase accessionNone
Sequence 
40- ACGGGUUAGGCUCUCGGGAGCU -62
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