MirGeneDB 2.1
MirGeneDB ID

Oan-Mir-30-P1a

Family name MIR-30 (all species)
Seed GUAAACA
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-30d
Paralogues Oan-Mir-30-P1b  Oan-Mir-30-P1d  Oan-Mir-30-P2a  Oan-Mir-30-P2b  Oan-Mir-30-P2d 
Orthologues Aca-Mir-30-P1a  Ami-Mir-30-P1a  Bta-Mir-30-P1a  Cfa-Mir-30-P1a  Cli-Mir-30-P1a  Cmi-Mir-30-P1a  Cpi-Mir-30-P1a  Cpo-Mir-30-P1a  Dno-Mir-30-P1a  Dre-Mir-30-P1a  Ete-Mir-30-P1a  Gga-Mir-30-P1a  Gja-Mir-30-P1a  Gmo-Mir-30-P1a  Hsa-Mir-30-P1a  Lch-Mir-30-P1a  Loc-Mir-30-P1a  Mal-Mir-30-P1a  Mdo-Mir-30-P1a  Mml-Mir-30-P1a  Mmu-Mir-30-P1a  Mun-Mir-30-P1a  Ocu-Mir-30-P1a  Pbv-Mir-30-P1a  Rno-Mir-30-P1a  Sha-Mir-30-P1a  Spt-Mir-30-P1a  Sto-Mir-30-P1a  Tgu-Mir-30-P1a  Tni-Mir-30-P1a  Xla-Mir-30-P1a1  Xla-Mir-30-P1a2  Xtr-Mir-30-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041731.1: 6889147-6889208 [-]
Clustered miRNAs
(< 50kb from Mir-30-P1a)		 Mir-30-P2a NC_041731.1: 6885357-6885416 [-]
Mir-30-P1a NC_041731.1: 6889147-6889208 [-]
Precursor
(pre-Mir +30nt flank)
CAGUUAGAAAUUGCAGAGAAAGUCUGUGGCUGUAAACAUCCCCGACUGGAAGCUGUAAAAUACCUUCAAGCUUUCAGUCAGAUGUUUGCUACCACUGGCAUUUCAGAGUCAUCCACCCGUUU
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Structure
        10         20         30        40        50        60 
CAGUUAGAAAUUGCAGA-    -|  U    CU         CCC           GUAAAA 
                  GAAA GUC GUGG  GUAAACAUC   GACUGGAAGCU      U
                  CUUU CGG CACC  CGUUUGUAG   CUGACUUUCGA      A
UUUGCCCACCUACUGAGA    A^  U    AU         A--           ACUUCC 
120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Oan-Mir-30-P1a_5p
mirBase accessionMIMAT0007041
Sequence 
0- UGUAAACAUCCCCGACUGGAAGCU -24
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Star sequence

Oan-Mir-30-P1a_3p*
mirBase accessionMIMAT0007042
Sequence 
40- CUUUCAGUCAGAUGUUUGCUAC -62
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