MirGeneDB 2.1
MirGeneDB ID

Mal-Mir-30-P1a

Family name MIR-30 (all species)
Seed GUAAACA
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-30-P1b  Mal-Mir-30-P1d  Mal-Mir-30-P2a  Mal-Mir-30-P2b  Mal-Mir-30-P2d 
Orthologues Aca-Mir-30-P1a  Ami-Mir-30-P1a  Bta-Mir-30-P1a  Cfa-Mir-30-P1a  Cli-Mir-30-P1a  Cmi-Mir-30-P1a  Cpi-Mir-30-P1a  Cpo-Mir-30-P1a  Dno-Mir-30-P1a  Dre-Mir-30-P1a  Ete-Mir-30-P1a  Gga-Mir-30-P1a  Gja-Mir-30-P1a  Gmo-Mir-30-P1a  Hsa-Mir-30-P1a  Lch-Mir-30-P1a  Loc-Mir-30-P1a  Mdo-Mir-30-P1a  Mml-Mir-30-P1a  Mmu-Mir-30-P1a  Mun-Mir-30-P1a  Oan-Mir-30-P1a  Ocu-Mir-30-P1a  Pbv-Mir-30-P1a  Rno-Mir-30-P1a  Sha-Mir-30-P1a  Spt-Mir-30-P1a  Sto-Mir-30-P1a  Tgu-Mir-30-P1a  Tni-Mir-30-P1a  Xla-Mir-30-P1a1  Xla-Mir-30-P1a2  Xtr-Mir-30-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884842.1: 61700-61759 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCUGAGGUUACAGAUGGGUAUUUUGGGGCUGUAAACAUCCCCGACUGGAAGCUGUCUAUCUGCAGAGCUUUCAGUCUGAUGUUUGCUUCUGCCGACUGCCUCCAGCUCCCGUCUGUCUG
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Structure
        10          20         30        40        50        60
AGCUGAGGUUACAGAUG--|   UU    -  CU         CCC           GUCUA 
                   GGUA  UUGG GG  GUAAACAUC   GACUGGAAGCU     U
                   CCGU  AGCC UC  CGUUUGUAG   CUGACUUUCGA     C
GUCUGUCUGCCCUCGACCU^   C-    G  UU         U--           GACGU 
.       110       100         90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-30-P1a_5p
mirBase accessionNone
Sequence 
0- UGUAAACAUCCCCGACUGGAAGCU -24
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Star sequence

Mal-Mir-30-P1a_3p*
mirBase accessionNone
Sequence 
38- CUUUCAGUCUGAUGUUUGCUUC -60
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