MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-219-P3-as

Family name MIR-219 (all species)
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-219c
Paralogues Mmu-Mir-219-P2  Mmu-Mir-219-P2-as  Mmu-Mir-219-P3 
Orthologues Aae-Mir-219  Aca-Mir-219-P3  Aga-Mir-219  Agr-Mir-219  Ami-Mir-219-P3  Bfl-Mir-219  Bge-Mir-219  Bko-Mir-219  Bla-Mir-219  Bpl-Mir-219  Bta-Mir-219-P3  Cfa-Mir-219-P3  Cin-Mir-219  Cja-Mir-219-P3  Cmi-Mir-219-P3  Cpi-Mir-219-P3  Cpo-Mir-219-P3  Csc-Mir-219  Cte-Mir-219  Dan-Mir-219  Dgr-Mir-219  Dlo-Mir-219  Dma-Mir-219  Dme-Mir-219  Dmo-Mir-219  Dno-Mir-219-P3  Dpu-Mir-219  Dre-Mir-219-P3a  Dsi-Mir-219  Dya-Mir-219  Eba-Mir-219  Eca-Mir-219-P3  Egr-Mir-219  Esc-Mir-219  Ete-Mir-219-P3  Gja-Mir-219-P3  Gmo-Mir-219-P3a  Gmo-Mir-219-P3b  Gpa-Mir-219  Gsa-Mir-219  Gsp-Mir-219  Hmi-Mir-219  Hru-Mir-219  Hsa-Mir-219-P3  Isc-Mir-219  Laf-Mir-219-P3  Lan-Mir-219  Lch-Mir-219-P3  Llo-Mir-219  Mal-Mir-219-P3a  Mal-Mir-219-P3b  Mdo-Mir-219-P3  Mgi-Mir-219  Mml-Mir-219-P3  Mmr-Mir-219-P3  Mom-Mir-219  Mun-Mir-219-P3-v1  Neu-Mir-219-P3  Obi-Mir-219  Ocu-Mir-219-P3  Ofu-Mir-219  Ovu-Mir-219  Pab-Mir-219-P3  Pau-Mir-219  Pbv-Mir-219-P3  Pca-Mir-219  Pcr-Mir-219  Pfl-Mir-219  Pmi-Mir-219  Pve-Mir-219  Rno-Mir-219-P3  Rph-Mir-219  Sha-Mir-219-P3  Sko-Mir-219  Sma-Mir-219  Sne-Mir-219  Snu-Mir-219  Spt-Mir-219-P3  Spu-Mir-219  Sro-Mir-219  Sto-Mir-219-P3-v1  Tca-Mir-219  Tni-Mir-219-P3a  Tni-Mir-219-P3b  Tur-Mir-219  War-Mir-219  Xbo-Mir-219 
Node of Origin (locus) M. musculus
Node of Origin (family) Bilateria
Genome context
(mm10)		 chr17: 34025012-34025073 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-219-P3-as)		 Mir-219-P3 chr17: 34025010-34025072 [-] UCSC Ensembl
Mir-219-P3-as chr17: 34025012-34025073 [+] UCSC Ensembl
Seed GACGUCC
Precursor
(pre-Mir +30nt flank)		 
UCCCCCUCGAGGUUUGGGGGCGGCGGCUCGGGACGUCCAGACGCAACUCUCGGCCGGAGCCAGAGACUCGAGAAUUGCGUUUGGACAAUCAGGAGCCGCGGCCCGGGACGGGGAGAGAAGCG
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Structure
        10         20        30         40        50        60
UCCCCCUCGAGGUUUGG-    G       GG  C-|           C     GCCGGAG 
                  GGGC GCGGCUC  GA  GUCCAGACGCAA UCUCG       C
                  CCCG CGCCGAG  CU  CAGGUUUGCGUU AGAGC       C
GCGAAGAGAGGGGCAGGG    G       GA  AA^           A     UCAGAGA 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-219-P3-as_5p
mirBase accessionMIMAT0029892
Sequence 
0- GGACGUCCAGACGCAACUCUCG -22
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Proposed targets TargetScanVert: mmu-miR-219c-5p
miRDB: MIMAT0029892
Star sequence

Mmu-Mir-219-P3-as_3p*
mirBase accessionMIMAT0029893
Sequence 
40- AGAAUUGCGUUUGGACAAUCAG -62
Get sequence
Proposed targets TargetScanVert: mmu-miR-219c-3p
miRDB: MIMAT0029893