MirGeneDB 3.0

50 microRNA genes with node of origin M. musculus

						Sort by genome coordinates								Motifs
MirGeneDB ID ▲	MiRBase ID	Family	Seed	5p accession	3p accession	Chromosome	Start	End	Strand	Node of origin (locus)	Node of origin (family)	Iso­miR	3' NTU	UG	UGUG	CNNC
Mmu-Mir-219-P3-as	mmu-mir-219c	MIR-219	GACGUCC	MIMAT0029892	MIMAT0029893	chr17	34025012	34025073	+	M. musculus	Bilateria		No
Mmu-Mir-506-P11a	mmu-mir-465a	MIR-506	AUCAGGG	MIMAT0002106	MIMAT0004217	chrX	66839063	66839121	-	M. musculus	Eutheria		No	1		1
Mmu-Mir-506-P11b1	mmu-mir-465b-1	MIR-506	AUCAGGG	MIMAT0004871	MIMAT0004872	chrX	66835774	66835832	-	M. musculus	Eutheria		No	1
Mmu-Mir-506-P11b2	mmu-mir-465b-2	MIR-506	AUCAGGG	MIMAT0004871	MIMAT0004872	chrX	66829212	66829270	-	M. musculus	Eutheria		No	1
Mmu-Mir-506-P11c1	mmu-mir-465c-1	MIR-506	AUCAGGG	MIMAT0004873	MIMAT0004874	chrX	66832527	66832587	-	M. musculus	Eutheria		No	1		1
Mmu-Mir-506-P11c2	mmu-mir-465c-2	MIR-506	AUCAGGG	MIMAT0004873	MIMAT0004874	chrX	66825965	66826025	-	M. musculus	Eutheria		No	1		1
Mmu-Mir-506-P11d	mmu-mir-465d	MIR-506	AUUUAGA	MIMAT0029880	MIMAT0029881	chrX	66822655	66822713	-	M. musculus	Eutheria		No	1
Mmu-Mir-506-P12	mmu-mir-470	MIR-506	UCUUGGA	MIMAT0002111	MIMAT0004760	chrX	66813961	66814017	-	M. musculus	Eutheria		No
Mmu-Mir-506-P20	mmu-mir-883b	MIR-506	AACUGCA	MIMAT0004850	MIMAT0004851	chrX	66789899	66789957	-	M. musculus	Eutheria		No	1
Mmu-Mir-701	mmu-mir-701	MIR-701	UAGCCGC	MIMAT0003491	MIMAT0017257	chr5	111004170	111004228	+	M. musculus	M. musculus		No			1
Mmu-Mir-1198	mmu-mir-1198	MIR-1198	AUGUGUU	MIMAT0005859	MIMAT0017332	chrX	7807142	7807201	+	M. musculus	M. musculus		No	1		1
Mmu-Mir-1929	mmu-mir-1929	MIR-1929	UCUAGGA	MIMAT0009392	MIMAT0022729	chr10	44359692	44359755	+	M. musculus	M. musculus		No
Mmu-Mir-1930	mmu-mir-1930	MIR-1930	CCUCCAU	MIMAT0009393	MIMAT0017340	chr10	77641236	77641295	+	M. musculus	M. musculus		No
Mmu-Mir-1933	mmu-mir-1933	MIR-1933	CAGGACC	MIMAT0009396	MIMAT0009397	chr11	21344599	21344664	-	M. musculus	M. musculus		No		1	1
Mmu-Mir-1934	mmu-mir-1934	MIR-1934	GGAUGAC	MIMAT0009398	MIMAT0017341	chr11	69663055	69663113	+	M. musculus	M. musculus		No
Mmu-Mir-1941 V	mmu-mir-1941	MIR-1941	AGGGAGA	MIMAT0009405	MIMAT0009406	chr15	101369363	101369423	+	M. musculus	M. musculus	2	No
Mmu-Mir-1943	mmu-mir-1943	MIR-1943	AGGGAGG	MIMAT0009408	MIMAT0017342	chr15	79375235	79375293	-	M. musculus	M. musculus		No			1
Mmu-Mir-1947	mmu-mir-1947	MIR-1947	GGACGAG	MIMAT0009413	MIMAT0017343	chr16	33105375	33105432	+	M. musculus	M. musculus		No
Mmu-Mir-1948	mmu-mir-1948	MIR-1948	UUAGGCA	MIMAT0017344	MIMAT0009415	chr18	12714825	12714883	+	M. musculus	M. musculus		No
Mmu-Mir-1953	mmu-mir-1953	MIR-1953	GGGAAAG	MIMAT0009424	None	chr2	151967543	151967602	-	M. musculus	M. musculus		No
Mmu-Mir-1958	mmu-mir-1958	MIR-1958	AGGAAAG	None	MIMAT0009431	chr4	48213134	48213200	-	M. musculus	M. musculus		No
Mmu-Mir-1960	mmu-mir-1960	MIR-1960	CAGUGCU	MIMAT0009433	None	chr5	30170751	30170807	+	M. musculus	M. musculus		No
Mmu-Mir-1964	mmu-mir-1964	MIR-1964	CGACUUC	MIMAT0017349	MIMAT0009437	chr7	29773305	29773365	+	M. musculus	M. musculus		No			1
Mmu-Mir-3057	mmu-mir-3057	MIR-3057	UUGGAGC	MIMAT0014822	MIMAT0014823	chr10	81271610	81271675	+	M. musculus	M. musculus		No
Mmu-Mir-3058	mmu-mir-3058	MIR-3058	CAGCCAC	MIMAT0014813	MIMAT0014814	chr10	95559243	95559308	-	M. musculus	M. musculus		No
Mmu-Mir-3060	mmu-mir-3060	MIR-3060	CAUAGCA	MIMAT0014826	MIMAT0014827	chr11	4139377	4139434	+	M. musculus	M. musculus		No	1		1
Mmu-Mir-3061	mmu-mir-3061	MIR-3061	AGUGGGC	MIMAT0014828	MIMAT0014829	chr11	52126759	52126825	+	M. musculus	M. musculus		No	1
Mmu-Mir-3066	mmu-mir-3066	MIR-3066	UGGUUGC	MIMAT0014838	MIMAT0014839	chr12	17355404	17355463	+	M. musculus	M. musculus		No			1
Mmu-Mir-3067	mmu-mir-3067	MIR-3067	GUUCUCA	MIMAT0014840	MIMAT0014841	chr12	81166165	81166224	+	M. musculus	M. musculus		No			1
Mmu-Mir-3073	mmu-mir-3073a	MIR-3073	UGAUGUC	MIMAT0014854	MIMAT0014855	chr12	112109252	112109311	+	M. musculus	M. musculus		No
Mmu-Mir-3073-as	mmu-mir-3073b	MIR-3073	UGGUCAC	MIMAT0022375	MIMAT0022376	chr12	112109250	112109309	-	M. musculus	M. musculus		No	1		1
Mmu-Mir-3079	mmu-mir-3079	MIR-3079	UUGAUCU	MIMAT0014866	MIMAT0014867	chr15	76290892	76290954	-	M. musculus	M. musculus		No
Mmu-Mir-3080	mmu-mir-3080	MIR-3080	GAAGCGC	MIMAT0014868	MIMAT0014869	chr15	82959228	82959285	-	M. musculus	M. musculus		No		1
Mmu-Mir-3081	mmu-mir-3081	MIR-3081	UGCGCUC	MIMAT0014870	MIMAT0014871	chr16	44558058	44558115	-	M. musculus	M. musculus		No			1
Mmu-Mir-3086	mmu-mir-3086	MIR-3086	AGAUUGU	MIMAT0014880	MIMAT0014881	chr19	58911686	58911744	-	M. musculus	M. musculus		No	1		1
Mmu-Mir-3090	mmu-mir-3090	MIR-3090	CCCAGGU	MIMAT0014901	MIMAT0014902	chr2	133564722	133564781	+	M. musculus	M. musculus		No
Mmu-Mir-3091	mmu-mir-3091	MIR-3091	GGGCCUG	MIMAT0014903	MIMAT0014904	chr2	180257547	180257601	+	M. musculus	M. musculus		No
Mmu-Mir-3092	mmu-mir-3092	MIR-3092	AAUGGGG	MIMAT0014905	MIMAT0014906	chr3	27584915	27584979	-	M. musculus	M. musculus		No
Mmu-Mir-3093	mmu-mir-3093	MIR-3093	GUGGACA	MIMAT0014907	MIMAT0014908	chr3	88215186	88215247	+	M. musculus	M. musculus		No			1
Mmu-Mir-3095	mmu-mir-3095	MIR-3095	GGACACU	MIMAT0014911	MIMAT0014912	chr4	58441023	58441085	-	M. musculus	M. musculus		No
Mmu-Mir-3098	mmu-mir-3098	MIR-3098	CCUAACA	MIMAT0014917	MIMAT0014918	chr6	125195807	125195867	+	M. musculus	M. musculus		No			1
Mmu-Mir-3101 V	mmu-mir-3101	MIR-3101	AGCUUUG	MIMAT0014921	MIMAT0014922	chr7	27176020	27176078	-	M. musculus	M. musculus	2	No	1
Mmu-Mir-3105	mmu-mir-3105	MIR-3105	GAGCAAG	MIMAT0014941	MIMAT0014942	chr7	144009267	144009325	+	M. musculus	M. musculus		No	1		1
Mmu-Mir-3109	mmu-mir-3109	MIR-3109	AUGGAUG	MIMAT0014949	MIMAT0014950	chr9	69456958	69457017	+	M. musculus	M. musculus		No	1	1
Mmu-Mir-3110	mmu-mir-3110	MIR-3110	UCUGCCU	MIMAT0014951	MIMAT0014952	chrX	38210453	38210509	+	M. musculus	M. musculus		No		1	1
Mmu-Mir-5621	mmu-mir-5621	MIR-5621	GGGCCCU	MIMAT0022369	MIMAT0022370	chr11	115795824	115795886	+	M. musculus	M. musculus		No			1
Mmu-Mir-5626	mmu-mir-5626	MIR-5626	AGCAGUU	MIMAT0022381	MIMAT0022382	chr9	70405694	70405753	-	M. musculus	M. musculus		No		1
Mmu-Mir-7211	mmu-mir-7211	MIR-7211	GGAGUGA	MIMAT0028390	MIMAT0028391	chr10	94586137	94586199	-	M. musculus	M. musculus		No			1
Mmu-Mir-7220	mmu-mir-7220	MIR-7220	CAGGAAC	MIMAT0028408	MIMAT0028409	chr18	60953873	60953932	+	M. musculus	M. musculus		No			1
Mmu-Mir-7647	mmu-mir-7647	MIR-7647	AGUCCAG	MIMAT0029796	MIMAT0029797	chr5	123522636	123522695	-	M. musculus	M. musculus		No

(red - mature/co-mature, blue - star)

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