MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-3081

Family name MIR-3081 (all species)
Seed UGCGCUC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-3081
Paralogues
Orthologues
Node of Origin (locus) M. musculus
Node of Origin (family) M. musculus
Genome context
(mm10)
chr16: 44558058-44558115 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUUGGAGCUCGAGCGCUGGGCUGGGGCUCAGACUGGAGCUUGGAGCGGUGAGCUGGACUCGGGCUUGCGCUCCGAUCUCUGAGCUGGGCUCUUGCCCGGAAUCCCAGCGCUUGACUG
Get precursor sequence
Structure
        10          20        30        40        50         
GGUUGGAGCUCGAGCGC--|    U         AC     C       G UG   UGGA 
                   UGGGC GGGGCUCAG  UGGAG UUGGAGC G  AGC    \
                   GCCCG UCUCGGGUC  GUCUC AGCCUCG C  UCG    C
GUCAGUUCGCGACCCUAAG^    U         GA     U       - GU   GGCU 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-3081_5p*

mirBase accessionMIMAT0014870
Sequence
0- AGACUGGAGCUUGGAGCGGUGAGC -24
Get sequence
Proposed targets TargetScanVert: mmu-miR-3081-5p
miRDB: MIMAT0014870
Mature sequence

Mmu-Mir-3081_3p

mirBase accessionMIMAT0014871
Sequence
35- UUGCGCUCCGAUCUCUGAGCUGG -58
Get sequence
Proposed targets TargetScanVert: mmu-miR-3081-3p
miRDB: MIMAT0014871