MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-3066

Family name MIR-3066 (all species)
Seed UGGUUGC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-3066
Paralogues
Orthologues
Node of Origin (locus) M. musculus
Node of Origin (family) M. musculus
Genome context
(mm10)
chr12: 17355404-17355463 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUAAAAUGGGAGUGAGUAGUGUGGUAUGUUUUGGUUGCUGUAGAUUAAGUAGUUUAAUAUGAUGCUGCACUUAAUAGACCGCAACCUGCACUGGCCAUGCUCUGGGCUGCGCACAGGGCU
Get precursor sequence
Structure
        10          20        30        40        50          
UUAAAAUGGGAGUGAGU--|       AU  UUU      U  AG       A  UUAAUA 
                   AGUGUGGU  GU   GGUUGC GU  AUUAAGU GU      \
                   UCGUACCG  CA   CCAACG CA  UAAUUCA CG      U
UCGGGACACGCGUCGGGUC^       GU  CGU      C  GA       -  UCGUAG 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Mature sequence

Mmu-Mir-3066_5p

mirBase accessionMIMAT0014838
Sequence
0- UUGGUUGCUGUAGAUUAAGUAGU -23
Get sequence
Proposed targets TargetScanVert: mmu-miR-3066-5p
miRDB: MIMAT0014838
Star sequence

Mmu-Mir-3066_3p*

mirBase accessionMIMAT0014839
Sequence
37- CACUUAAUAGACCGCAACCUGCA -60
Get sequence
Proposed targets TargetScanVert: mmu-miR-3066-3p
miRDB: MIMAT0014839