MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-3098

Family name MIR-3098 (all species)
Seed CCUAACA
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-3098
Paralogues
Orthologues
Node of Origin (locus) M. musculus
Node of Origin (family) M. musculus
Genome context
(mm10)
chr6: 125195807-125195867 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGCCCUCCACACAUUGUGGUUGGGAGGAGUCCUAACAGCAGGAGUAGGAGCUCUGAUUAUCCCCUGCUUCUGCUGCCUGCCUUUAGGACCCUUUCCCCACAACCGGCUGCCUUGCCCAGC
Get precursor sequence
Structure
        10            20        30        40         50         
AGGCCCUCCACACAUUG----|  UU GG   A       CA     -         UCUGAU 
                     UGG  G  AGG GUCCUAA  GCAGG AGUAGGAGC      U
                     ACC  C  UCC CAGGAUU  CGUCC UCGUCUUCG      A
CGACCCGUUCCGUCGGCCAAC^  C- UU   -       UC     G         UCCCCU 
 .       110       100          90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Mature sequence

Mmu-Mir-3098_5p

mirBase accessionMIMAT0014917
Sequence
0- UCCUAACAGCAGGAGUAGGAGC -22
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Proposed targets TargetScanVert: mmu-miR-3098-5p
miRDB: MIMAT0014917
Star sequence

Mmu-Mir-3098_3p*

mirBase accessionMIMAT0014918
Sequence
38- UUCUGCUGCCUGCCUUUAGGACC -61
Get sequence
Proposed targets TargetScanVert: mmu-miR-3098-3p
miRDB: MIMAT0014918