MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-1958

Family name MIR-1958 (all species)
Seed AGGAAAG
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-1958
Paralogues
Orthologues
Node of Origin (locus) M. musculus
Node of Origin (family) M. musculus
Genome context
(mm10)
chr4: 48213134-48213200 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGGUCUUAGUGAUGAGCCUAGAAGAGAACUUACUGCUUCCACUUUCCUAUAGUUUAAUUUCUAACUGCAUUCUAUAGGAAAGUGGAAGCAGUAAGUUCUCUUCUAGGUUCCGUGACCUCACCAGCU
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Structure
        10          20        30        40        50        60   
AUGGUCUUAGUGAUGAG--|                                  GUUUAAUUUC 
                   CCUAGAAGAGAACUUACUGCUUCCACUUUCCUAUA          \
                   GGAUCUUCUCUUGAAUGACGAAGGUGAAAGGAUAU          U
UCGACCACUCCAGUGCCUU^                                  CUUACGUCAA 
     120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-1958_5p*

mirBase accessionNone
Sequence
0- UUACUGCUUCCACUUUCCUAUA -22
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Mature sequence

Mmu-Mir-1958_3p

mirBase accessionMIMAT0009431
Sequence
45- UAGGAAAGUGGAAGCAGUAAGU -67
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Proposed targets microrna.org: MIMAT0009431
TargetScanVert: mmu-miR-1958
miRDB: MIMAT0009431