MirGeneDB 2.1
MirGeneDB ID

Cmi-Mir-219-P3

Family name MIR-219 (all species)
Seed GAUUGUC
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-219-P2 
Orthologues Aae-Mir-219  Aca-Mir-219-P3  Ami-Mir-219-P3  Bfl-Mir-219  Bge-Mir-219  Bla-Mir-219  Bta-Mir-219-P3  Cfa-Mir-219-P3  Cgi-Mir-219  Cin-Mir-219  Cpi-Mir-219-P3  Cpo-Mir-219-P3  Csc-Mir-219  Cte-Mir-219  Dan-Mir-219  Dma-Mir-219  Dme-Mir-219  Dmo-Mir-219  Dno-Mir-219-P3  Dpu-Mir-219  Dre-Mir-219-P3a  Dsi-Mir-219  Dya-Mir-219  Esc-Mir-219  Ete-Mir-219-P3  Gja-Mir-219-P3  Gmo-Mir-219-P3a  Gmo-Mir-219-P3b  Hsa-Mir-219-P3  Isc-Mir-219  Lan-Mir-219  Lch-Mir-219-P3  Mal-Mir-219-P3a  Mal-Mir-219-P3b  Mdo-Mir-219-P3  Mml-Mir-219-P3  Mmu-Mir-219-P3  Mmu-Mir-219-P3-as  Mun-Mir-219-P3-v1  Mun-Mir-219-P3-v2  Obi-Mir-219  Ocu-Mir-219-P3  Ovu-Mir-219  Pbv-Mir-219-P3  Pfl-Mir-219  Pmi-Mir-219  Rno-Mir-219-P3  Sha-Mir-219-P3  Sko-Mir-219  Spt-Mir-219-P3  Spu-Mir-219  Sto-Mir-219-P3-v1  Sto-Mir-219-P3-v2  Tca-Mir-219  Tni-Mir-219-P3a  Tni-Mir-219-P3b  Xbo-Mir-219 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 AAVX02055268.1: 1010-1073 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGUGGUGGAGCUGCGAGAGCUCUGGCUGCUGAUUGUCCGAAUGCAAUUCUUGUGGAAUUUUGUAAGGACCGAGGAUUGUGGUCGGACAUUAACAGCCGGUCCUCACUGAGCAUCUGUCCGUCU
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Structure
        10          20        30        40        50        60  
GAGUGGUGGAGCUGCGA--|  CU       C    U      AU          UGGAAUUU 
                   GAG  CUGGCUG UGAU GUCCGA  GCAAUUCUUG        \
                   CUC  GGCCGAC AUUA CAGGCU  UGUUAGGAGC        U
UCUGCCUGUCUACGAGUCA^  CU       A    -      GG          CAGGAAUG 
  120       110       100        90         80        70
Deep sequencing
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CommentThe MIR-219 family shows substantial variation of arm-usage and is currently, across all species, considered a co-mature.
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Mature sequence

Cmi-Mir-219-P3_5p
mirBase accessionNone
Sequence 
0- UGAUUGUCCGAAUGCAAUUCUUG -23
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Co-mature sequence

Cmi-Mir-219-P3_3p
mirBase accessionNone
Sequence 
42- AGGAUUGUGGUCGGACAUUAAC -64
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