MirGeneDB 2.1
MirGeneDB ID

Lpo-Mir-71-P8

Family name MIR-71 (all species)
Seed CUCACUA
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-71-P7  Lpo-Mir-71-P9  Lpo-Mir-71-P10  Lpo-Mir-71-P11  Lpo-Mir-71-P12  Lpo-Mir-71-P13 
Orthologues Aae-Mir-71  Asu-Mir-71  Bfl-Mir-71  Bge-Mir-71  Bla-Mir-71  Cbr-Mir-71  Cel-Mir-71  Cgi-Mir-71  Cte-Mir-71  Dma-Mir-71  Dpu-Mir-71  Esc-Mir-71  Hme-Mir-71  Isc-Mir-71  Lgi-Mir-71  Npo-Mir-71  Obi-Mir-71  Ovu-Mir-71  Pfl-Mir-71  Pmi-Mir-71  Sko-Mir-71  Spu-Mir-71  Tca-Mir-71 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013665701.1: 206173-206230 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CGUUAACAUAAGGAUUAACCAUCUCUUCCGUGAAAGACAUGGGUAGUGAGAUGACCUGUUCUAGCAUCUCACUACCUUGUCUUUGACGGAACAGUAGGAAAUAUUCAUCAGAUUAUAA
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Structure
        10          20        30        40        50         
CGUUAACAUAAGGAUUAA--| AU  C      G       U             ACCUG 
                    CC  CU UUCCGU AAAGACA GGGUAGUGAGAUG     \
                    GG  GA AAGGCA UUUCUGU UCCAUCACUCUAC     U
AAUAUUAGACUACUUAUAAA^ AU  C      G       -             GAUCU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Star sequence

Lpo-Mir-71-P8_5p*
mirBase accessionNone
Sequence 
0- UGAAAGACAUGGGUAGUGAGAUG -23
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Mature sequence

Lpo-Mir-71-P8_3p
mirBase accessionNone
Sequence 
36- UCUCACUACCUUGUCUUUGACG -58
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