MirGeneDB 2.1
MirGeneDB ID

Lpo-Mir-71-P10

Family name MIR-71 (all species)
Seed CUCACUA
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-71-P7  Lpo-Mir-71-P8  Lpo-Mir-71-P9  Lpo-Mir-71-P11  Lpo-Mir-71-P12  Lpo-Mir-71-P13 
Orthologues Aae-Mir-71  Asu-Mir-71  Bfl-Mir-71  Bge-Mir-71  Bla-Mir-71  Cbr-Mir-71  Cel-Mir-71  Cgi-Mir-71  Cte-Mir-71  Dma-Mir-71  Dpu-Mir-71  Esc-Mir-71  Hme-Mir-71  Isc-Mir-71  Lgi-Mir-71  Npo-Mir-71  Obi-Mir-71  Ovu-Mir-71  Pfl-Mir-71  Pmi-Mir-71  Sko-Mir-71  Spu-Mir-71  Tca-Mir-71 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013666453.1: 400160-400219 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAUAGAAAAACGAGAGAAGCAUUUUUCCUGUGAAAGACAUGGGUAGUGAGAUGUGAUUAAGGCAACCAUCUCACUACCUUGUCUUUGACGGAAAGGGUGAUAAGAACUUCGUGGUAACAA
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Structure
        10          20        30        40        50          
UAUAGAAAAACGAGAGAAG--|      C    G       U             UGAUUA 
                     CAUUUUU CUGU AAAGACA GGGUAGUGAGAUG      \
                     GUGGGAA GGCA UUUCUGU UCCAUCACUCUAC      A
AACAAUGGUGCUUCAAGAAUA^      A    G       -             CAACGG 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Star sequence

Lpo-Mir-71-P10_5p*
mirBase accessionNone
Sequence 
0- UGAAAGACAUGGGUAGUGAGAUG -23
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Mature sequence

Lpo-Mir-71-P10_3p
mirBase accessionNone
Sequence 
38- UCUCACUACCUUGUCUUUGACG -60
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