MirGeneDB 2.1
MirGeneDB ID

Aca-Mir-30-P2d

Family name MIR-30 (all species)
Seed GUAAACA
Species Green anole lizard (Anolis carolinensis)
MiRBase ID
Paralogues Aca-Mir-30-P1a  Aca-Mir-30-P1b  Aca-Mir-30-P1d  Aca-Mir-30-P2a  Aca-Mir-30-P2b 
Orthologues Ami-Mir-30-P2d  Bta-Mir-30-P2d  Cfa-Mir-30-P2d  Cli-Mir-30-P2d  Cmi-Mir-30-P2d  Cpi-Mir-30-P2d  Cpo-Mir-30-P2d  Dno-Mir-30-P2d  Dre-Mir-30-P2d  Ete-Mir-30-P2d  Gga-Mir-30-P2d  Gja-Mir-30-P2d  Gmo-Mir-30-P2d  Hsa-Mir-30-P2d  Lch-Mir-30-P2d  Loc-Mir-30-P2d  Mal-Mir-30-P2d  Mdo-Mir-30-P2d  Mml-Mir-30-P2d  Mmu-Mir-30-P2d  Mun-Mir-30-P2d  Oan-Mir-30-P2d  Ocu-Mir-30-P2d  Pbv-Mir-30-P2d  Rno-Mir-30-P2d  Sha-Mir-30-P2d  Spt-Mir-30-P2d  Sto-Mir-30-P2d  Tgu-Mir-30-P2d  Tni-Mir-30-P2d  Xla-Mir-30-P2d1  Xla-Mir-30-P2d2  Xtr-Mir-30-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(anoCar2)		 GL343308.1: 254254-254314 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGAUACAUCAAUUCACAUGUAGCAGCGCAUGUAAACAUCCUACACUCUCAGCUGUGAAUUUGUGGUGGCUGGGAGAAGGUUGUUUACACCUUCUGCCAUGGACUAUCACCCAAACACAAC
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Structure
        10        20          30        40        50        60 
CCGAUACAUCAAUUCACAUGUA--|   CGCA        U   ACA         GUGAAU 
                        GCAG    UGUAAACA CCU   CUCUCAGCU      \
                        CGUC    ACAUUUGU GGA   GAGGGUCGG      U
CAACACAAACCCACUAUCAGGUAC^   UUCC        U   A--         UGGUGU 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Sk To Wh
Mature sequence

Aca-Mir-30-P2d_5p
mirBase accessionNone
Sequence 
0- UGUAAACAUCCUACACUCUCAGCU -24
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Star sequence

Aca-Mir-30-P2d_3p*
mirBase accessionNone
Sequence 
39- CUGGGAGAAGGUUGUUUACACC -61
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