Mir
Gene
DB
2.1
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41 microRNA genes with seed UGACAUC
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
▼
3' NTU
UG
UGUG
CNNC
Sha-Novel-16-P27c
None
SHA-NOVEL-16
UGACAUC
None
None
GL868171.1
6266
6326
+
S. harrisii
S. harrisii
No
1
1
1
Ami-Mir-1662
ami-mir-1662
MIR-1662
UGACAUC
MIMAT0038318
None
NW_017707901.1
29917428
29917485
+
Tetrapoda
Tetrapoda
Unknown
1
Xtr-Mir-1662
None
MIR-1662
UGACAUC
None
None
chrUn_NW_016683472v1
318148
318205
+
Tetrapoda
Tetrapoda
No
1
Cli-Mir-1662
cli-mir-1662
MIR-1662
UGACAUC
MIMAT0038689
MIMAT0038690
scaffold450
607999
608056
-
Tetrapoda
Tetrapoda
No
1
Pbv-Mir-1662
pbv-mir-1662
MIR-1662
UGACAUC
MIMAT0039082
None
KE959870.1
33153
33212
+
Tetrapoda
Tetrapoda
Unknown
1
1
Gja-Mir-1662-P3
None
MIR-1662
UGACAUC
None
None
NW_015245705.1
305
364
+
G. japonicus
Tetrapoda
Unknown
1
Xla-Mir-1662-P1
None
MIR-1662
UGACAUC
None
None
NC_030734.1
6906895
6906952
-
X. laevis
Tetrapoda
No
1
Gja-Mir-1662-P4
None
MIR-1662
UGACAUC
None
None
NW_015245705.1
305
364
+
G. japonicus
Tetrapoda
Unknown
1
Xla-Mir-1662-P2
None
MIR-1662
UGACAUC
None
None
NC_030735.1
5595665
5595722
-
X. laevis
Tetrapoda
No
1
Mun-Mir-1662
None
MIR-1662
UGACAUC
None
None
1662_LR594632.1:58385579-58385722
44
101
-
Tetrapoda
Tetrapoda
No
1
Tgu-Mir-1662
tgu-mir-1662
MIR-1662
UGACAUC
MIMAT0014459
None
2
3143419
3143476
-
Tetrapoda
Tetrapoda
Unknown
1
Cpi-Mir-1662
cpi-mir-1662
MIR-1662
UGACAUC
MIMAT0037918
MIMAT0037919
JH584507
4701911
4701968
-
Tetrapoda
Tetrapoda
Unknown
1
Gga-Mir-1662
gga-mir-1662
MIR-1662
UGACAUC
MIMAT0007543
None
2
1911596
1911653
+
Tetrapoda
Tetrapoda
No
1
Spt-Mir-1662
None
MIR-1662
UGACAUC
None
None
QEPC01003143.1
2536524
2536580
-
Tetrapoda
Tetrapoda
Unknown
1
Aca-Mir-1662
aca-mir-1662
MIR-1662
UGACAUC
MIMAT0021794
MIMAT0021795
6
2558253
2558313
+
Tetrapoda
Tetrapoda
No
Rno-Mir-489
rno-mir-489
MIR-489
UGACAUC
MIMAT0017196
MIMAT0003113
chr4
28659547
28659606
-
Osteichthyes
Osteichthyes
No
1
Sha-Mir-489
None
MIR-489
UGACAUC
None
None
GL849401.1
2379
2438
+
Osteichthyes
Osteichthyes
No
Tni-Mir-489-v1
tni-mir-489
MIR-489
UGACAUC
None
MIMAT0002939
21_random
1370454
1370512
+
Osteichthyes
Osteichthyes
No
1
Pbv-Mir-489
pbv-mir-489
MIR-489
UGACAUC
None
MIMAT0039062
KE954238.1
44131
44190
-
Osteichthyes
Osteichthyes
Unknown
1
Xla-Mir-489-P2-v1
None
MIR-489
UGACAUC
None
None
NC_030735.1
24837837
24837895
-
X. laevis
Osteichthyes
No
1
Ocu-Mir-489
ocu-mir-489
MIR-489
UGACAUC
MIMAT0048477
MIMAT0048478
chr10
35345574
35345633
+
Osteichthyes
Osteichthyes
No
1
Mal-Mir-489-v1
None
MIR-489
UGACAUC
None
None
KV884831.1
258106
258164
-
Osteichthyes
Osteichthyes
No
1
Cpi-Mir-489-v1
cpi-mir-489
MIR-489
UGACAUC
MIMAT0037897
MIMAT0037898
JH584862
1032484
1032543
-
Osteichthyes
Osteichthyes
No
1
Gja-Mir-489
None
MIR-489
UGACAUC
None
None
NW_015172008.1
309050
309109
-
Osteichthyes
Osteichthyes
Unknown
1
Hsa-Mir-489-v1
hsa-mir-489
MIR-489
UGACAUC
MIMAT0026605
MIMAT0002805
chr7
93483947
93484006
-
Osteichthyes
Osteichthyes
No
1
Cfa-Mir-489
cfa-mir-489
MIR-489
UGACAUC
None
MIMAT0009860
chr14
18980191
18980250
-
Osteichthyes
Osteichthyes
No
1
Tgu-Mir-489-v1
tgu-mir-489
MIR-489
UGACAUC
MIMAT0027024
MIMAT0014618
2
24306046
24306105
-
Osteichthyes
Osteichthyes
No
1
Bta-Mir-489-v1
bta-mir-489
MIR-489
UGACAUC
None
MIMAT0009942
NC_037331.1
10822879
10822938
-
Osteichthyes
Osteichthyes
No
1
Gga-Mir-489-v1
gga-mir-489
MIR-489
UGACAUC
MIMAT0026632
MIMAT0003365
2
23119351
23119410
-
Osteichthyes
Osteichthyes
No
1
Dre-Mir-489-v1
dre-mir-489
MIR-489
UGACAUC
None
MIMAT0002940
chr19
40781190
40781248
-
Osteichthyes
Osteichthyes
No
1
Mml-Mir-489-v1
mml-mir-489
MIR-489
UGACAUC
MIMAT0026883
MIMAT0006349
chr3
118803471
118803530
-
Osteichthyes
Osteichthyes
No
1
Gmo-Mir-489-v1
gmo-mir-489
MIR-489
UGACAUC
MIMAT0044023
MIMAT0044024
contig308539
565
623
-
Osteichthyes
Osteichthyes
No
1
Spt-Mir-489
None
MIR-489
UGACAUC
None
None
QEPC01001500.1
1527986
1528045
+
Osteichthyes
Osteichthyes
Unknown
1
Lch-Mir-489
None
MIR-489
UGACAUC
None
None
JH128944.1
60346
60405
-
Osteichthyes
Osteichthyes
Unknown
1
Loc-Mir-489-v1
None
MIR-489
UGACAUC
None
None
LG11
37047670
37047728
-
Osteichthyes
Osteichthyes
No
1
Aca-Mir-489-v1
aca-mir-489
MIR-489
UGACAUC
MIMAT0021974
MIMAT0021975
6
21750917
21750976
-
Osteichthyes
Osteichthyes
No
1
Ami-Mir-489-v1
ami-mir-489
MIR-489
UGACAUC
MIMAT0038295
MIMAT0038296
NW_017712875.1
7248485
7248544
-
Osteichthyes
Osteichthyes
No
1
Xla-Mir-489-P1-v1
None
MIR-489
UGACAUC
None
None
NC_030734.1
29791980
29792039
-
X. laevis
Osteichthyes
No
1
Xtr-Mir-489-v1
xtr-mir-489
MIR-489
UGACAUC
None
MIMAT0003642
chr6
24122623
24122682
-
Osteichthyes
Osteichthyes
No
1
Dno-Mir-489
dno-mir-489
MIR-489
UGACAUC
MIMAT0047920
MIMAT0047921
JH574710
687595
687653
+
Osteichthyes
Osteichthyes
No
1
Cli-Mir-489-v1
cli-mir-489
MIR-489
UGACAUC
MIMAT0038656
MIMAT0038657
scaffold169
1811717
1811776
+
Osteichthyes
Osteichthyes
No
1
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