MirGeneDB 3.0
119 microRNA genes with seed UGCAUUG
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Bge-Mir-33 None MIR-33 UGCAUUG None None KZ617909.1 260966 261026 - Bilateria Bilateria Yes 1 1
Csc-Mir-33 None MIR-33 UGCAUUG None None NW_019386109.1 60418 60476 - Bilateria Bilateria Unknown 1
Cte-Mir-33 cte-mir-33 MIR-33 UGCAUUG MIMAT0009553 None CAPTEscaffold_91 237768 237827 - Bilateria Bilateria No 1
Dan-Mir-33 dan-mir-33 MIR-33 UGCAUUG MIMAT0008461 None scaffold_13337 19456811 19456871 - Bilateria Bilateria No 1 1
Dgr-Mir-33 None MIR-33 UGCAUUG None None CAJFCJ010000012.1 1333134 1333195 + Bilateria Bilateria Unknown
Dme-Mir-33 dme-mir-33 MIR-33 UGCAUUG MIMAT0000342 MIMAT0020808 3L 19797986 19798046 + Bilateria Bilateria No 1 1
Dmo-Mir-33 dmo-mir-33 MIR-33 UGCAUUG MIMAT0008695 None scaffold_6680 17552852 17552915 - Bilateria Bilateria No 1 1
Dsi-Mir-33 dsi-mir-33 MIR-33 UGCAUUG MIMAT0008866 None 3L 19298938 19298998 + Bilateria Bilateria No 1 1
Dya-Mir-33 dya-mir-33 MIR-33 UGCAUUG MIMAT0009063 None 3L 20771343 20771403 - Bilateria Bilateria No 1 1
Eba-Mir-33 None MIR-33 UGCAUUG None None WURV02104212.1 6946 7005 + Bilateria Bilateria Unknown 1
Ebu-Mir-33 None MIR-33 UGCAUUG None None FYBX02010125.1 1289018 1289078 + Bilateria Bilateria Unknown 1 1
Efe-Mir-33 None MIR-33 UGCAUUG None None Efet.01.624189 927 989 + Bilateria Bilateria No 1
Egr-Mir-33 None MIR-33 UGCAUUG None None APAU02000003.1 1278320 1278380 - Bilateria Bilateria No
Esc-Mir-33 None MIR-33 UGCAUUG None None CM044487.1 128755265 128755323 - Bilateria Bilateria No 1 1
Gpa-Mir-33 None MIR-33 UGCAUUG None None Scaffold27 1646314 1646379 + Bilateria Bilateria No 1
Gsp-Mir-33 None MIR-33 UGCAUUG None None OX940783.1 6497610 6497676 + Bilateria Bilateria Unknown 1
Hru-Mir-33 None MIR-33 UGCAUUG None None JALGQA010000007.1 6957478 6957536 + Bilateria Bilateria No 1
Lgi-Mir-33 lgi-mir-33 MIR-33 UGCAUUG MIMAT0009567 MIMAT0009568 LOTGIsca_111 788865 788923 + Bilateria Bilateria Unknown 1
Llo-Mir-33 None MIR-33 UGCAUUG None None OU343000.1 14885295 14885353 - Bilateria Bilateria Unknown 1
Mgi-Mir-33 None MIR-33 UGCAUUG None None scaffold40442 43816 43873 - Bilateria Bilateria No 1
Mom-Mir-33 None MIR-33 UGCAUUG None None JARFOD010090435.1 2658 2717 - Bilateria Bilateria Unknown 1
Npo-Mir-33 None MIR-33 UGCAUUG None None JACATO010000339.1 1425657 1425714 - Bilateria Bilateria Unknown 1 1
Obi-Mir-33 None MIR-33 UGCAUUG None None KQ419605 424419 424477 + Bilateria Bilateria No 1 1
Ofu-Mir-33 None MIR-33 UGCAUUG None None CAIIXF020000002.1 20706378 20706434 - Bilateria Bilateria No 1 1 1
Ovu-Mir-33 None MIR-33 UGCAUUG None None RXHP01008821.1 291110 291168 + Bilateria Bilateria No 1 1
Pau-Mir-33 None MIR-33 UGCAUUG None None NMRA01000044.1 234141 234198 + Bilateria Bilateria Unknown 1
Pca-Mir-33 None MIR-33 UGCAUUG None None KQ715068.1 122910 122968 - Bilateria Bilateria Unknown 1
Pcr-Mir-33 None MIR-33 UGCAUUG None None CAJQUW010015576.1 13297 13360 + Bilateria Bilateria No 1
Pfl-Mir-33 None MIR-33 UGCAUUG None None LD343728.1 540210 540271 - Bilateria Bilateria Unknown 1
Pmi-Mir-33 pmi-mir-33 MIR-33 UGCAUUG MIMAT0032148 None JH781496.1 16214 16270 + Bilateria Bilateria No 1
Snu-Mir-33 None MIR-33 UGCAUUG None None CM049315.1 10413207 10413265 + Bilateria Bilateria Unknown 1 1
Spu-Mir-33 spu-mir-33 MIR-33 UGCAUUG MIMAT0009658 None AAGJ06000011.1 28175102 28175163 + Bilateria Bilateria No 1 1
Tca-Mir-33 tca-mir-33 MIR-33 UGCAUUG MIMAT0008363 MIMAT0019107 LG4 8315299 8315354 - Bilateria Bilateria No 1 1
War-Mir-33 None MIR-33 UGCAUUG None None WNLI01189098.1 296 353 - Bilateria Bilateria Unknown 1
Xbo-Mir-33 None MIR-33 UGCAUUG None None scaffold893 68498 68555 + Bilateria Bilateria Unknown 1 1 1
Pma-Mir-33-o1 pma-mir-33a MIR-33 UGCAUUG MIMAT0019433 None NC_046094.1 312250 312305 - P. marinus Bilateria Unknown
Pma-Mir-33-o2 pma-mir-33b MIR-33 UGCAUUG MIMAT0019434 None NC_046140.1 1502770 1502832 + P. marinus Bilateria No
Pma-Mir-33-o3 None MIR-33 UGCAUUG None None NC_046111.1 1209366 1209429 - P. marinus Bilateria Unknown
Aca-Mir-33-P1 aca-mir-33-2 MIR-33 UGCAUUG MIMAT0021934 MIMAT0021936 GL343500.1 19241 19299 + Gnathostomata Bilateria No 1 1 1
Ami-Mir-33-P1 ami-mir-33-2 MIR-33 UGCAUUG MIMAT0038092 MIMAT0038094 NW_017708532.1 1833 1891 - Gnathostomata Bilateria No 1 1 1
Bta-Mir-33-P1 bta-mir-33b MIR-33 UGCAUUG MIMAT0009295 None NC_037346.1 34647563 34647619 + Gnathostomata Bilateria No 1 1
Cfa-Mir-33-P1 cfa-mir-33b MIR-33 UGCAUUG MIMAT0009862 None chr5 41685180 41685238 + Gnathostomata Bilateria No 1
Cja-Mir-33-P1 None MIR-33 UGCAUUG None None CM021919.1 65464356 65464415 + Gnathostomata Bilateria Unknown 1 1
Cli-Mir-33-P1 cli-mir-33-2 MIR-33 UGCAUUG MIMAT0038464 MIMAT0038466 scaffold146 1338945 1339004 + Gnathostomata Bilateria No 1 1
Cmi-Mir-33-P1 None MIR-33 UGCAUUG None None KI636001.1 873870 873929 - Gnathostomata Bilateria No 1 1
Cpi-Mir-33-P1 cpi-mir-33-2 MIR-33 UGCAUUG MIMAT0037689 MIMAT0037691 JH584542 9197615 9197674 + Gnathostomata Bilateria No 1 1 1
Cpo-Mir-33-P1 cpo-mir-33b MIR-33 UGCAUUG MIMAT0046920 MIMAT0046921 scaffold_65 1533833 1533891 - Gnathostomata Bilateria No 1 1
Dno-Mir-33-P1 dno-mir-33b MIR-33 UGCAUUG MIMAT0047573 MIMAT0047574 JH565112 379000 379055 + Gnathostomata Bilateria No 1
Ete-Mir-33-P1 None MIR-33 UGCAUUG None None JH980362 5069303 5069361 - Gnathostomata Bilateria Unknown 1
Gga-Mir-33-P1 gga-mir-33-2 MIR-33 UGCAUUG MIMAT0037539 None 14 5309753 5309812 - Gnathostomata Bilateria No 1 1
Gja-Mir-33-P1 None MIR-33 UGCAUUG None None NW_015177012.1 59654 59713 + Gnathostomata Bilateria Unknown 1 1 1
Hsa-Mir-33-P1 hsa-mir-33b MIR-33 UGCAUUG MIMAT0003301 MIMAT0004811 chr17 17813858 17813916 - Gnathostomata Bilateria No 1
Laf-Mir-33-P1 None MIR-33 UGCAUUG None None GL010123.1 2518915 2518971 - Gnathostomata Bilateria Unknown 1
Lch-Mir-33-P1 None MIR-33 UGCAUUG None None BAHO01271459.1 1204 1263 - Gnathostomata Bilateria Unknown 1 1
Loc-Mir-33-P1 None MIR-33 UGCAUUG None None LG13 16126873 16126932 - Gnathostomata Bilateria No 1 1
Mun-Mir-33-P1 None MIR-33 UGCAUUG None None LR594639.1 8972208 8972267 + Gnathostomata Bilateria Unknown 1
Oan-Mir-33-P1 oan-mir-33a MIR-33 UGCAUUG MIMAT0006817 MIMAT0006818 NC_041729.1 34459075 34459133 + Gnathostomata Bilateria No 1 1
Ocu-Mir-33-P1 None MIR-33 UGCAUUG None None 1944924069 423 481 - Gnathostomata Bilateria No 1 1
Pab-Mir-33-P1 None MIR-33 UGCAUUG None None CM054698.2 18453514 18453572 + Gnathostomata Bilateria Unknown 1
Pbv-Mir-33-P1 pbv-mir-33-2 MIR-33 UGCAUUG MIMAT0038882 None KE958500.1 70424 70483 - Gnathostomata Bilateria Unknown 1 1
Spt-Mir-33-P1 None MIR-33 UGCAUUG None None QEPC01010859.1 15243921 15243979 - Gnathostomata Bilateria Unknown 1 1 1
Sto-Mir-33-P1 None MIR-33 UGCAUUG None None BFAA01010650.1 31834 31890 - Gnathostomata Bilateria Unknown 1 1 1
Tgu-Mir-33-P1 None MIR-33 UGCAUUG None None 14 5834816 5834875 - Gnathostomata Bilateria No 1 1
Xtr-Mir-33-P1 xtr-mir-33a MIR-33 UGCAUUG MIMAT0003680 None chr9 9608388 9608447 + Gnathostomata Bilateria No 1 1 1
Gmo-Mir-33-P1a gmo-mir-33b-1 MIR-33 UGCAUUG MIMAT0044147 MIMAT0044148 GeneScaffold_1755 666477 666535 + Clupeocephala Bilateria No 1 1
Mal-Mir-33-P1a None MIR-33 UGCAUUG None None KV884862.1 1293232 1293292 - Clupeocephala Bilateria No 1 1 1
Tni-Mir-33-P1a None MIR-33 UGCAUUG None None 3 9418172 9418232 - Clupeocephala Bilateria Yes 1 1
Gmo-Mir-33-P1b gmo-mir-33b-2 MIR-33 UGCAUUG MIMAT0044147 MIMAT0046045 GeneScaffold_1754 204967 205025 + Clupeocephala Bilateria Yes 1
Mal-Mir-33-P1b None MIR-33 UGCAUUG None None KV884859.1 677355 677414 - Clupeocephala Bilateria Yes 1 1
Tni-Mir-33-P1b None MIR-33 UGCAUUG None None 2 6025426 6025486 + Clupeocephala Bilateria Unknown 1 1
Xla-Mir-33-P1c None MIR-33 UGCAUUG None None NC_030740.1 111938572 111938631 - X. laevis Bilateria No 1 1
Xla-Mir-33-P1d xla-mir-33a MIR-33 UGCAUUG MIMAT0046580 MIMAT0046581 NC_030741.1 99915860 99915919 - X. laevis Bilateria Unknown 1 1
Aca-Mir-33-P3 aca-mir-33-1 MIR-33 UGCAUUG MIMAT0021934 MIMAT0021935 5 26778873 26778933 + Gnathostomata Bilateria No 1
Ami-Mir-33-P3 ami-mir-33-1 MIR-33 UGCAUUG MIMAT0038092 MIMAT0038093 NW_017710370.1 945279 945339 - Gnathostomata Bilateria No 1 1
Bta-Mir-33-P3 bta-mir-33a MIR-33 UGCAUUG MIMAT0009294 None NC_037332.1 112884579 112884639 + Gnathostomata Bilateria Yes 1 1
Cfa-Mir-33-P3 cfa-mir-33a MIR-33 UGCAUUG MIMAT0006593 None chr10 23456613 23456673 - Gnathostomata Bilateria Yes 1 1
Cja-Mir-33-P3 None MIR-33 UGCAUUG None None CM021915.1 186967182 186967242 - Gnathostomata Bilateria Unknown 1 1
Cli-Mir-33-P3 cli-mir-33-1 MIR-33 UGCAUUG MIMAT0038464 MIMAT0038465 scaffold1086 144834 144894 - Gnathostomata Bilateria Yes 1 1
Cmi-Mir-33-P3 None MIR-33 UGCAUUG None None KI636153.1 47935 47993 - Gnathostomata Bilateria No 1 1
Cpi-Mir-33-P3 cpi-mir-33-1 MIR-33 UGCAUUG MIMAT0037689 MIMAT0037690 JH584735 4836974 4837034 + Gnathostomata Bilateria No 1
Cpo-Mir-33-P3 cpo-mir-33a MIR-33 UGCAUUG MIMAT0046918 MIMAT0046919 scaffold_28 25329249 25329308 + Gnathostomata Bilateria No 1 1
Dno-Mir-33-P3 dno-mir-33a MIR-33 UGCAUUG MIMAT0047571 MIMAT0047572 JH583493 38832 38892 - Gnathostomata Bilateria No 1 1
Eca-Mir-33-P3 eca-mir-33a MIR-33 UGCAUUG MIMAT0013189 None CM009175.1 39390967 39391027 + Gnathostomata Bilateria Yes 1 1
Ete-Mir-33-P3 None MIR-33 UGCAUUG None None JH980300 12104974 12105033 + Gnathostomata Bilateria Unknown
Gga-Mir-33-P3 gga-mir-33-1 MIR-33 UGCAUUG MIMAT0001100 MIMAT0026490 1 49496339 49496399 - Gnathostomata Bilateria Yes 1 1
Gja-Mir-33-P3 None MIR-33 UGCAUUG None None NW_015159728.1 872123 872183 - Gnathostomata Bilateria No 1 1
Hsa-Mir-33-P3 hsa-mir-33a MIR-33 UGCAUUG MIMAT0000091 MIMAT0004506 chr22 41900949 41901009 + Gnathostomata Bilateria No 1 1
Laf-Mir-33-P3 None MIR-33 UGCAUUG None None GL010100.1 3373027 3373086 - Gnathostomata Bilateria No 1 1
Lch-Mir-33-P3 None MIR-33 UGCAUUG None None JH129755.1 152934 152994 + Gnathostomata Bilateria Unknown 1 1 1
Loc-Mir-33-P3 None MIR-33 UGCAUUG None None LG12 35659756 35659815 + Gnathostomata Bilateria Yes 1
Mal-Mir-33-P3 None MIR-33 UGCAUUG None None KV885030.1 240960 241019 + Gnathostomata Bilateria Yes 1
Mdo-Mir-33-P3 mdo-mir-33 MIR-33 UGCAUUG MIMAT0012754 MIMAT0026944 Un 28299329 28299388 + Gnathostomata Bilateria No 1
Mml-Mir-33-P3 mml-mir-33a MIR-33 UGCAUUG MIMAT0002392 None CM014345.1 9605778 9605838 - Gnathostomata Bilateria No 1 1
Mmr-Mir-33-P3 None MIR-33 UGCAUUG None None CM007667.1 5423977 5424035 + Gnathostomata Bilateria No 1 1
Mmu-Mir-33-P3 mmu-mir-33 MIR-33 UGCAUUG MIMAT0000667 MIMAT0004666 chr15 82198127 82198187 + Gnathostomata Bilateria No 1 1
Mun-Mir-33-P3 None MIR-33 UGCAUUG None None LR594632.1 303498881 303498941 - Gnathostomata Bilateria Unknown 1 1
Oan-Mir-33-P3 oan-mir-33b MIR-33 UGCAUUG MIMAT0006817 MIMAT0009191 NC_041741.1 47386578 47386638 + Gnathostomata Bilateria Yes 1
Ocu-Mir-33-P3 ocu-mir-33a MIR-33 UGCAUUG MIMAT0048165 MIMAT0048166 chrUn0036 661092 661151 - Gnathostomata Bilateria No 1 1
Pab-Mir-33-P3 None MIR-33 UGCAUUG None None CM068844.1 48370459 48370519 + Gnathostomata Bilateria No 1 1
Rno-Mir-33-P3 rno-mir-33 MIR-33 UGCAUUG MIMAT0000812 MIMAT0017104 chr7 123431617 123431677 + Gnathostomata Bilateria Yes 1 1
Spt-Mir-33-P3 None MIR-33 UGCAUUG None None QEPC01000856.1 148945 149005 + Gnathostomata Bilateria Unknown 1 1
Sto-Mir-33-P3 None MIR-33 UGCAUUG None None BFAA01008895.1 112963 113022 + Gnathostomata Bilateria Yes 1 1
Tgu-Mir-33-P3 tgu-mir-33 MIR-33 UGCAUUG MIMAT0014538 MIMAT0026993 1A 46735951 46736011 - Gnathostomata Bilateria Yes 1 1
Tni-Mir-33-P3 None MIR-33 UGCAUUG None None Un_random 5787244 5787303 + Gnathostomata Bilateria Yes 1
Xtr-Mir-33-P3 xtr-mir-33b MIR-33 UGCAUUG MIMAT0003681 None chr4 109768751 109768811 + Gnathostomata Bilateria Yes 1 1
Xla-Mir-33-P3a xla-mir-33b MIR-33 UGCAUUG MIMAT0046582 MIMAT0046583 NC_030730.1 112596721 112596781 + X. laevis Bilateria Yes 1 1
Xla-Mir-33-P3b None MIR-33 UGCAUUG None None NC_030731.1 94508913 94508973 - X. laevis Bilateria Yes 1 1
Bfl-Mir-33-P6 bfl-mir-33-2 MIR-33 UGCAUUG MIMAT0009474 None NC_049985.1 3904364 3904422 - Branchiostoma Bilateria Yes 1 1
Bla-Mir-33-P6 None MIR-33 UGCAUUG None None Sc0000046 702051 702109 + Branchiostoma Bilateria Unknown 1 1
Bfl-Mir-33-P7 bfl-mir-33-1 MIR-33 UGCAUUG MIMAT0009474 None NC_049985.1 3903955 3904013 - Branchiostoma Bilateria No 1
Hme-Mir-33-P8 hme-mir-33-1 MIR-33 UGCAUUG MIMAT0024980 None HE670818 67948 68008 + H. melpomene Bilateria No 1
Hme-Mir-33-P9 hme-mir-33-2 MIR-33 UGCAUUG MIMAT0024980 None HE671035 83696 83756 - H. melpomene Bilateria No 1
Lan-Mir-33-P10 None MIR-33 UGCAUUG None None LFEI01000134 325352 325410 + L. anatina Bilateria Unknown 1 1
Lan-Mir-33-P11 None MIR-33 UGCAUUG None None LFEI01000134 326967 327025 + L. anatina Bilateria Unknown 1 1
Lpo-Mir-33-P12 None MIR-33 UGCAUUG None None NW_013672261.1 39681 39738 + L. polyphemus Bilateria Unknown 1 1
Lpo-Mir-33-P13 None MIR-33 UGCAUUG None None NW_013670125.1 79713 79770 + L. polyphemus Bilateria Unknown 1 1
Lpo-Mir-33-P14 None MIR-33 UGCAUUG None None NW_013665791.1 314621 314678 + L. polyphemus Bilateria No 1
Pve-Mir-33-P17a None MIR-33 UGCAUUG None None Pve_Chr10 10269490 10269548 - Dentaliidae Bilateria No 1 1
Pve-Mir-33-P17b None MIR-33 UGCAUUG None None Pve_Chr10 10499123 10499181 - Dentaliidae Bilateria No 1 1

(red - mature/co-mature, blue - star)

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