MirGeneDB

MirGeneDB ID

Sto-Mir-124-P4-v1

Family name MIR-124 (all species)
Seed AAGGCAC
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-124-P1-v1  Sto-Mir-124-P1-v2  Sto-Mir-124-P2-v1  Sto-Mir-124-P2-v2  Sto-Mir-124-P3-v1  Sto-Mir-124-P3-v2  Sto-Mir-124-P4-v2 
Orthologues Aae-Mir-124  Aca-Mir-124-P4-v1  Aca-Mir-124-P4-v2  Ami-Mir-124-P4-v1  Ami-Mir-124-P4-v2  Asu-Mir-124  Bfl-Mir-124  Bge-Mir-124  Cel-Mir-124  Cpi-Mir-124-P4-v1  Cpi-Mir-124-P4-v2  Cte-Mir-124  Dan-Mir-124  Dme-Mir-124  Dmo-Mir-124  Dpu-Mir-124  Dre-Mir-124-P4-v1  Dre-Mir-124-P4-v2  Gga-Mir-124-P4-v1  Gga-Mir-124-P4-v2  Hme-Mir-124  Isc-Mir-124  Lan-Mir-124  Oan-Mir-124-P4-v1  Oan-Mir-124-P4-v2  Pfl-Mir-124  Pmi-Mir-124  Sko-Mir-124  Spu-Mir-124  Tca-Mir-124 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(miRNA_loci_genome)
BFAA01005146.1: 20484-20542 [+]
Precursor
(pre-Mir +30nt flank)
GGAGAAAGGGAGAAUUCGGUUCACACUCUGCGUGUUCACAGCGCACCUUGAUUUCAUAUUAUACAAUUAAGGCACGCGGUGAAUGCCAAGGGAGGAAUCGAAAAUAAGCUAUCUGGGAA
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Structure
        10           20        30        40        50         
GGAGAAAGGGAGAAUUC---|    ACA UC  C        A   CA       UUCAUA 
                    GGUUC   C  UG GUGUUCAC GCG  CCUUGAU      \
                    CUAAG   G  AC CGUAAGUG CGC  GGAAUUA      U
AAGGGUCUAUCGAAUAAAAG^    GAG GA  -        G   AC       ACAUAU 
       110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Star sequence

Sto-Mir-124-P4-v1_5p*

MirBase accessionNone
Sequence
0- CGUGUUCACAGCGCACCUUGAU -22
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Mature sequence

Sto-Mir-124-P4-v1_3p

MirBase accessionNone
Sequence
37- UAAGGCACGCGGUGAAUGCCAA -59
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