MirGeneDB

MirGeneDB ID

Sto-Mir-124-P2-v1

Family name MIR-124 (all species)
Seed AAGGCAC
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-124-P1-v1  Sto-Mir-124-P1-v2  Sto-Mir-124-P2-v2  Sto-Mir-124-P3-v1  Sto-Mir-124-P3-v2  Sto-Mir-124-P4-v1  Sto-Mir-124-P4-v2 
Orthologues Aae-Mir-124  Aca-Mir-124-P2-v1  Aca-Mir-124-P2-v2  Ami-Mir-124-P2-v1  Ami-Mir-124-P2-v2  Asu-Mir-124  Bfl-Mir-124  Bge-Mir-124  Bta-Mir-124-P2-v1  Bta-Mir-124-P2-v2  Cel-Mir-124  Cfa-Mir-124-P2-v1  Cfa-Mir-124-P2-v2  Cli-Mir-124-P2-v1  Cli-Mir-124-P2-v2  Cpi-Mir-124-P2-v1  Cpi-Mir-124-P2-v2  Cpo-Mir-124-P2-v1  Cpo-Mir-124-P2-v2  Cte-Mir-124  Dan-Mir-124  Dme-Mir-124  Dmo-Mir-124  Dno-Mir-124-P2-v1  Dno-Mir-124-P2-v2  Dpu-Mir-124  Dre-Mir-124-P2a-v1  Dre-Mir-124-P2a-v2  Dre-Mir-124-P2b-v1  Dre-Mir-124-P2b-v2  Ete-Mir-124-P2-v1  Ete-Mir-124-P2-v2  Gga-Mir-124-P2-v1  Gga-Mir-124-P2-v2  Hme-Mir-124  Hsa-Mir-124-P2-v1  Hsa-Mir-124-P2-v2  Isc-Mir-124  Lan-Mir-124  Mdo-Mir-124-P2-v1  Mdo-Mir-124-P2-v2  Mml-Mir-124-P2-v1  Mml-Mir-124-P2-v2  Mmu-Mir-124-P2-v1  Mmu-Mir-124-P2-v2  Oan-Mir-124-P2-v1  Oan-Mir-124-P2-v2  Ocu-Mir-124-P2-v1  Ocu-Mir-124-P2-v2  Pfl-Mir-124  Pmi-Mir-124  Rno-Mir-124-P2-v1  Rno-Mir-124-P2-v2  Sha-Mir-124-P2-v1  Sha-Mir-124-P2-v2  Sko-Mir-124  Spu-Mir-124  Tca-Mir-124  Tgu-Mir-124-P2-v1  Tgu-Mir-124-P2-v2  Xtr-Mir-124-P2-v1  Xtr-Mir-124-P2-v2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(miRNA_loci_genome)
BFAA01017286.1: 17091-17149 [+]
Precursor
(pre-Mir +30nt flank)
CUAUUAGAUGGAGAUCGGCCCCCAGCUCUCCGUGUUCACAGCGGACCUUGAUUUAAUGUUAUACAAUUAAGGCACGCGGUGAAUGCCAAGAGAGGGGCCGCUUAGCGUCCAGAGGAGCC
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Structure
        10            20        30        40        50         
CUAUUAGAUGGAGAUCG----|    CAG    CC        A   GA       UUAAUG 
                     GCCCC   CUCU  GUGUUCAC GCG  CCUUGAU      \
                     CGGGG   GAGA  CGUAAGUG CGC  GGAAUUA      U
CCGAGGAGACCUGCGAUUCGC^    A--    AC        G   AC       ACAUAU 
       110       100          90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Sto-Mir-124-P2-v1_5p*

MirBase accessionNone
Sequence
0- CGUGUUCACAGCGGACCUUGAU -22
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Mature sequence

Sto-Mir-124-P2-v1_3p

MirBase accessionNone
Sequence
37- UAAGGCACGCGGUGAAUGCCAA -59
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