MirGeneDB 2.1
MirGeneDB ID

Lch-Mir-124-P2

Family name MIR-124 (all species)
Seed AAGGCAC
Species Coelacanth (Latimeria chalumnae)
MiRBase ID
Paralogues Lch-Mir-124-P1  Lch-Mir-124-P3  Lch-Mir-124-P4 
Orthologues Aae-Mir-124  Aca-Mir-124-P2-v1  Aca-Mir-124-P2-v2  Ami-Mir-124-P2-v1  Ami-Mir-124-P2-v2  Asu-Mir-124  Bfl-Mir-124  Bge-Mir-124  Bla-Mir-124  Bta-Mir-124-P2-v1  Bta-Mir-124-P2-v2  Cel-Mir-124  Cfa-Mir-124-P2-v1  Cfa-Mir-124-P2-v2  Cmi-Mir-124-P2-v1  Cmi-Mir-124-P2-v2  Cpi-Mir-124-P2-v1  Cpi-Mir-124-P2-v2  Cpo-Mir-124-P2-v1  Cpo-Mir-124-P2-v2  Cte-Mir-124  Dan-Mir-124  Dma-Mir-124  Dme-Mir-124  Dmo-Mir-124  Dno-Mir-124-P2-v1  Dno-Mir-124-P2-v2  Dpu-Mir-124  Dre-Mir-124-P2a-v1  Dre-Mir-124-P2a-v2  Dsi-Mir-124  Dya-Mir-124  Esc-Mir-124  Ete-Mir-124-P2-v1  Ete-Mir-124-P2-v2  Gga-Mir-124-P2-v1  Gga-Mir-124-P2-v2  Gja-Mir-124-P2-v1  Gja-Mir-124-P2-v2  Hme-Mir-124  Hsa-Mir-124-P2-v1  Hsa-Mir-124-P2-v2  Isc-Mir-124  Lan-Mir-124  Loc-Mir-124-P2-v1  Loc-Mir-124-P2-v2  Mal-Mir-124-P2a-v1  Mal-Mir-124-P2a-v2  Mdo-Mir-124-P2-v1  Mdo-Mir-124-P2-v2  Mml-Mir-124-P2-v1  Mml-Mir-124-P2-v2  Mmu-Mir-124-P2-v1  Mmu-Mir-124-P2-v2  Mun-Mir-124-P2-v1  Mun-Mir-124-P2-v2  Npo-Mir-124  Obi-Mir-124  Ocu-Mir-124-P2-v1  Ocu-Mir-124-P2-v2  Ovu-Mir-124  Pbv-Mir-124-P2-v1  Pbv-Mir-124-P2-v2  Pfl-Mir-124  Pma-Mir-124-o2  Pmi-Mir-124  Rno-Mir-124-P2-v1  Rno-Mir-124-P2-v2  Sha-Mir-124-P2-v1  Sha-Mir-124-P2-v2  Sko-Mir-124  Spt-Mir-124-P2  Spu-Mir-124  Sto-Mir-124-P2-v1  Sto-Mir-124-P2-v2  Tca-Mir-124  Tgu-Mir-124-P2-v1  Tgu-Mir-124-P2-v2  Tni-Mir-124-P2a-v1  Tni-Mir-124-P2a-v2  Tni-Mir-124-P2b-v1  Tni-Mir-124-P2b-v2  Xbo-Mir-124  Xla-Mir-124-P2c-v1  Xla-Mir-124-P2c-v2  Xla-Mir-124-P2d-v1  Xla-Mir-124-P2d-v2  Xtr-Mir-124-P2-v1  Xtr-Mir-124-P2-v2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(LatCha1_add)		 JH128723.1: 124257-124317 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGCCAGAUAAAAGGGCCUUUUUCUCUCUUCGUGUUCACAGCGGACCUUGAUUUAAAUGUCCAUACAAUUAAGGCACGCGGUGAAUGCCAAGAGAGAGGCCAAAAACCAUCGCUAGAAACU
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Structure
        10        20          30        40        50          
UUGCCAGAUAAAAGGGCCUU--|         C        A   GA       UUAAAUG 
                      UUUCUCUCUU GUGUUCAC GCG  CCUUGAU       \
                      GGAGAGAGAA CGUAAGUG CGC  GGAAUUA       U
UCAAAGAUCGCUACCAAAAACC^         C        G   AC       ACAUACC 
 .       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Star sequence

Lch-Mir-124-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- CGUGUUCACAGCGGACCUUGAU -22
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Mature sequence

Lch-Mir-124-P2_3p (predicted)
mirBase accessionNone
Sequence 
39- UAAGGCACGCGGUGAAUGCCAA -61
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