MirGeneDB ID | Hsa-Mir-34-P2b |
Family name |
MIR-34 (all species) |
Species |
Human (Homo sapiens) |
MiRBase ID |
hsa-mir-34c
|
Paralogues |
Hsa-Mir-34-P1
Hsa-Mir-34-P2a
Hsa-Mir-34-P3a-v1
Hsa-Mir-34-P3b
Hsa-Mir-34-P3c
|
Orthologues |
Aae-Mir-34
Aca-Mir-34-P2b
Aga-Mir-34
Agr-Mir-34
Ami-Mir-34-P2b
Asu-Mir-34
Bge-Mir-34
Bta-Mir-34-P2b
Cbr-Mir-34
Cel-Mir-34
Cfa-Mir-34-P2b
Cin-Mir-34
Cja-Mir-34-P2b
Cli-Mir-34-P2b
Cmi-Mir-34-P2b
Cpi-Mir-34-P2b
Cpo-Mir-34-P2b
Cte-Mir-34
Dan-Mir-34
Dlo-Mir-34
Dma-Mir-34
Dme-Mir-34
Dmo-Mir-34
Dno-Mir-34-P2b
Dpu-Mir-34
Dre-Mir-34-P2b
Dsi-Mir-34
Dya-Mir-34
Ebu-Mir-34-P2b
Eca-Mir-34-P2b
Efe-Mir-34
Esc-Mir-34
Ete-Mir-34-P2b
Gga-Mir-34-P2b
Gja-Mir-34-P2b
Gpa-Mir-34
Gsp-Mir-34
Hmi-Mir-34
Hru-Mir-34
Isc-Mir-34
Laf-Mir-34-P2b
Lch-Mir-34-P2b
Lgi-Mir-34
Lhy-Mir-34
Llo-Mir-34
Loc-Mir-34-P2b
Mdo-Mir-34-P2b
Mgi-Mir-34
Mml-Mir-34-P2b
Mmr-Mir-34-P2b
Mmu-Mir-34-P2b
Mom-Mir-34
Mun-Mir-34-P2b
Npo-Mir-34
Oan-Mir-34-P2b
Obi-Mir-34
Ocu-Mir-34-P2b
Ofu-Mir-34
Ovu-Mir-34
Pab-Mir-34-P2b
Pau-Mir-34
Pbv-Mir-34-P2b
Pca-Mir-34
Pdu-Mir-34
Pfl-Mir-34
Pmi-Mir-34
Pve-Mir-34
Rno-Mir-34-P2b
Rph-Mir-34
Sha-Mir-34-P2b
Sko-Mir-34
Snu-Mir-34
Spt-Mir-34-P2b
Spu-Mir-34
Sto-Mir-34-P2b
Tca-Mir-34
Tgu-Mir-34-P2b
Tur-Mir-34
War-Mir-34
Xla-Mir-34-P2b1a
Xla-Mir-34-P2b1b
Xla-Mir-34-P2b2a
Xla-Mir-34-P2b2b
Xtr-Mir-34-P2b1
Xtr-Mir-34-P2b2
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Bilateria
|
Genome context (hg38) |
chr11: 111513451-111513505 [+]
UCSC
Ensembl
|
Clustered miRNAs (< 50kb from Mir-34-P2b) |
Mir-34-P2a
chr11: 111512951-111513009 [+]
UCSC
Ensembl
Mir-34-P2b
chr11: 111513451-111513505 [+]
UCSC
Ensembl
|
Seed |
GGCAGUG |
Precursor (pre-Mir +30nt flank) |
ACUGCAAUUUUUUCUAUGAGUCUAGUUACUAGGCAGUGUAGUUAGCUGAUUGCUAAUAGUACCAAUCACUAACCACACGGCCAGGUAAAAAGAUUUGGGAAUUCGUCCAAAUGAG
Get precursor sequence
|
Structure | 10 20 30 40 50
ACUGCAAUUUUUUCUAU--| AG A A A C CUAA
GAGUCU UUACU GGC GUGU GUUAG UGAUUG U
UUUAGA AAUGG CCG CACA CAAUC ACUAAC A
GAGUAAACCUGCUUAAGGG^ AA A G C - CAUG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
|
Dc |
Dc |
Dr |
Dr |
Xp |
Xp |
Bl |
Br |
Br |
Ce |
Ce |
Co |
Fo |
He |
Ki |
Le |
Li |
Li |
Lu |
Pa |
Pl |
Pl |
Sk |
Sk |
Sk |
Sm |
Sp |
Sp |
St |
Te |
Th |
Ut |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Mature sequence |
Hsa-Mir-34-P2b_5p |
mirBase accession | MIMAT0000686 |
Sequence |
0- AGGCAGUGUAGUUAGCUGAUUGC -23
Get sequence
|
Proposed targets |
microrna.org: MIMAT0000686
TargetScanVert: hsa-miR-34c-5p
TargetMiner: hsa-miR-34c-5p
miRDB: MIMAT0000686
|
Star sequence |
Hsa-Mir-34-P2b_3p* |
mirBase accession | MIMAT0004677 |
Sequence |
33- AAUCACUAACCACACGGCCAGG -55
Get sequence
|
Proposed targets |
microrna.org: MIMAT0004677
TargetScanVert: hsa-miR-34c-3p
TargetMiner: hsa-miR-34c-3p
miRDB: MIMAT0004677
|