MirGeneDB ID | Mml-Mir-34-P2b |
Family name |
MIR-34 (all species) |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-34c
|
Paralogues |
Mml-Mir-34-P1
Mml-Mir-34-P2a
Mml-Mir-34-P3b
Mml-Mir-34-P3c
|
Orthologues |
Aae-Mir-34
Aca-Mir-34-P2b
Aga-Mir-34
Agr-Mir-34
Ami-Mir-34-P2b
Asu-Mir-34
Bge-Mir-34
Bta-Mir-34-P2b
Cbr-Mir-34
Cel-Mir-34
Cfa-Mir-34-P2b
Cin-Mir-34
Cja-Mir-34-P2b
Cli-Mir-34-P2b
Cmi-Mir-34-P2b
Cpi-Mir-34-P2b
Cpo-Mir-34-P2b
Cte-Mir-34
Dan-Mir-34
Dlo-Mir-34
Dma-Mir-34
Dme-Mir-34
Dmo-Mir-34
Dno-Mir-34-P2b
Dpu-Mir-34
Dre-Mir-34-P2b
Dsi-Mir-34
Dya-Mir-34
Ebu-Mir-34-P2b
Eca-Mir-34-P2b
Efe-Mir-34
Esc-Mir-34
Ete-Mir-34-P2b
Gga-Mir-34-P2b
Gja-Mir-34-P2b
Gpa-Mir-34
Gsp-Mir-34
Hmi-Mir-34
Hru-Mir-34
Hsa-Mir-34-P2b
Isc-Mir-34
Laf-Mir-34-P2b
Lch-Mir-34-P2b
Lgi-Mir-34
Lhy-Mir-34
Llo-Mir-34
Loc-Mir-34-P2b
Mdo-Mir-34-P2b
Mgi-Mir-34
Mmr-Mir-34-P2b
Mmu-Mir-34-P2b
Mom-Mir-34
Mun-Mir-34-P2b
Npo-Mir-34
Oan-Mir-34-P2b
Obi-Mir-34
Ocu-Mir-34-P2b
Ofu-Mir-34
Ovu-Mir-34
Pab-Mir-34-P2b
Pau-Mir-34
Pbv-Mir-34-P2b
Pca-Mir-34
Pdu-Mir-34
Pfl-Mir-34
Pmi-Mir-34
Pve-Mir-34
Rno-Mir-34-P2b
Rph-Mir-34
Sha-Mir-34-P2b
Sko-Mir-34
Snu-Mir-34
Spt-Mir-34-P2b
Spu-Mir-34
Sto-Mir-34-P2b
Tca-Mir-34
Tgu-Mir-34-P2b
Tur-Mir-34
War-Mir-34
Xla-Mir-34-P2b1a
Xla-Mir-34-P2b1b
Xla-Mir-34-P2b2a
Xla-Mir-34-P2b2b
Xtr-Mir-34-P2b1
Xtr-Mir-34-P2b2
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Bilateria
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014349.1: 104648772-104648826 [+]
UCSC
Ensembl
|
Clustered miRNAs (< 50kb from Mir-34-P2b) |
Mir-34-P2a
CM014349.1: 104648270-104648328 [+]
UCSC
Ensembl
Mir-34-P2b
CM014349.1: 104648772-104648826 [+]
UCSC
Ensembl
|
Seed |
GGCAGUG |
Precursor (pre-Mir +30nt flank) |
UGCAAAUUUUUUUUCAUGAGUCUAGUUACCAGGCAGUGUAGUUAGCUGAUUGCUGAUAGUACCAAUCACUAACCACACGGCCAGGUAAAAAGAUUUGGGAAUUCAUCCAAAUGAG
Get precursor sequence
|
Structure | 10 20 30 40 50
UGCAAAUUUUUUUUCAU--| AG A A A C CUGA
GAGUCU UUACC GGC GUGU GUUAG UGAUUG U
UUUAGA AAUGG CCG CACA CAAUC ACUAAC A
GAGUAAACCUACUUAAGGG^ AA A G C - CAUG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
|
Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Mature sequence |
Mml-Mir-34-P2b_5p |
mirBase accession | MIMAT0006175 |
Sequence |
0- AGGCAGUGUAGUUAGCUGAUUGC -23
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-34c-5p
|
Star sequence |
Mml-Mir-34-P2b_3p* |
mirBase accession | MIMAT0006176 |
Sequence |
33- AAUCACUAACCACACGGCCAGG -55
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-34c-3p
|