MirGeneDB ID | Hsa-Mir-34-P1 |
Family name |
MIR-34 (all species) |
Species |
Human (Homo sapiens) |
MiRBase ID |
hsa-mir-34a
|
Paralogues |
Hsa-Mir-34-P2a
Hsa-Mir-34-P2b
Hsa-Mir-34-P3a-v1
Hsa-Mir-34-P3b
Hsa-Mir-34-P3c
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Orthologues |
Aae-Mir-34
Aca-Mir-34-P1
Aga-Mir-34
Agr-Mir-34
Ami-Mir-34-P1
Asu-Mir-34
Bge-Mir-34
Bta-Mir-34-P1
Cbr-Mir-34
Cel-Mir-34
Cfa-Mir-34-P1
Cin-Mir-34
Cja-Mir-34-P1
Cli-Mir-34-P1
Cmi-Mir-34-P1
Cpi-Mir-34-P1
Cpo-Mir-34-P1
Cte-Mir-34
Dan-Mir-34
Dlo-Mir-34
Dma-Mir-34
Dme-Mir-34
Dmo-Mir-34
Dno-Mir-34-P1
Dpu-Mir-34
Dre-Mir-34-P1
Dsi-Mir-34
Dya-Mir-34
Ebu-Mir-34-P1
Eca-Mir-34-P1
Efe-Mir-34
Esc-Mir-34
Ete-Mir-34-P1
Gga-Mir-34-P1
Gja-Mir-34-P1
Gmo-Mir-34-P1
Gpa-Mir-34
Gsp-Mir-34
Hmi-Mir-34
Hru-Mir-34
Isc-Mir-34
Laf-Mir-34-P1
Lch-Mir-34-P1
Lgi-Mir-34
Lhy-Mir-34
Llo-Mir-34
Loc-Mir-34-P1
Mal-Mir-34-P1
Mdo-Mir-34-P1
Mgi-Mir-34
Mml-Mir-34-P1
Mmr-Mir-34-P1
Mmu-Mir-34-P1
Mom-Mir-34
Mun-Mir-34-P1
Neu-Mir-34-P1
Npo-Mir-34
Oan-Mir-34-P1
Obi-Mir-34
Ocu-Mir-34-P1
Ofu-Mir-34
Ovu-Mir-34
Pab-Mir-34-P1
Pau-Mir-34
Pbv-Mir-34-P1
Pca-Mir-34
Pdu-Mir-34
Pfl-Mir-34
Pma-Mir-34-P1
Pmi-Mir-34
Pve-Mir-34
Rno-Mir-34-P1
Rph-Mir-34
Sha-Mir-34-P1
Sko-Mir-34
Snu-Mir-34
Spt-Mir-34-P1
Spu-Mir-34
Sto-Mir-34-P1
Tca-Mir-34
Tgu-Mir-34-P1
Tni-Mir-34-P1
Tur-Mir-34
War-Mir-34
Xla-Mir-34-P1a
Xla-Mir-34-P1b
Xtr-Mir-34-P1
|
Node of Origin (locus) |
Gnathostomata
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Node of Origin (family) |
Bilateria
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Genome context (hg38) |
chr1: 9151692-9151756 [-]
UCSC
Ensembl
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Seed |
GGCAGUG |
Precursor (pre-Mir +30nt flank) |
CCGUGGACCGGCCAGCUGUGAGUGUUUCUUUGGCAGUGUCUUAGCUGGUUGUUGUGAGCAAUAGUAAGGAAGCAAUCAGCAAGUAUACUGCCCUAGAAGUGCUGCACGUUGUGGGGCCCAAGAGG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CCGUGGACCGGCCAGCU- - UG UU -| A GUGAGCAA
GUG AG UUUCU GGCAGUGU CUU GCUGGUUGUU \
CAC UC GAAGA CCGUCAUA GAA CGACUAACGA U
GGAGAACCCGGGGUGUUG G GU UC U^ - AGGAAUGA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
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Comment | There is a second Dicer cut -1 on both arms. |
3' NTU |
No
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Motifs | UG at 5p(-14), UGUG in loop |
Tissue expression
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Dc |
Dc |
Dr |
Dr |
Xp |
Xp |
Bl |
Br |
Br |
Ce |
Ce |
Co |
Fo |
He |
Ki |
Le |
Li |
Li |
Lu |
Pa |
Pl |
Pl |
Sk |
Sk |
Sk |
Sm |
Sp |
Sp |
St |
Te |
Th |
Ut |
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Mature sequence |
Hsa-Mir-34-P1_5p |
mirBase accession | MIMAT0000255 |
Sequence |
0- UGGCAGUGUCUUAGCUGGUUGUU -23
Get sequence
|
Proposed targets |
microrna.org: MIMAT0000255
TargetScanVert: hsa-miR-34a-5p
TargetMiner: hsa-miR-34a-5p
miRDB: MIMAT0000255
|
Star sequence |
Hsa-Mir-34-P1_3p* |
mirBase accession | MIMAT0004557 |
Sequence |
42- CAAUCAGCAAGUAUACUGCCCUA -65
Get sequence
|
Proposed targets |
microrna.org: MIMAT0004557
TargetScanVert: hsa-miR-34a-3p
TargetMiner: hsa-miR-34a-3p
miRDB: MIMAT0004557
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