MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-30-P2a

Family name MIR-30 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-30-P1a  Ete-Mir-30-P1b  Ete-Mir-30-P1d  Ete-Mir-30-P2b  Ete-Mir-30-P2d 
Orthologues Aca-Mir-30-P2a  Ami-Mir-30-P2a  Bta-Mir-30-P2a  Cfa-Mir-30-P2a  Cja-Mir-30-P2a  Cmi-Mir-30-P2a  Cpi-Mir-30-P2a  Cpo-Mir-30-P2a  Dno-Mir-30-P2a  Dre-Mir-30-P2a  Eca-Mir-30-P2a  Gga-Mir-30-P2a  Gja-Mir-30-P2a  Gmo-Mir-30-P2a  Hsa-Mir-30-P2a  Laf-Mir-30-P2a  Lch-Mir-30-P2a  Loc-Mir-30-P2a  Mal-Mir-30-P2a  Mdo-Mir-30-P2a  Mml-Mir-30-P2a  Mmr-Mir-30-P2a  Mmu-Mir-30-P2a  Mun-Mir-30-P2a  Neu-Mir-30-P2a  Oan-Mir-30-P2a  Ocu-Mir-30-P2a  Pab-Mir-30-P2a  Pbv-Mir-30-P2a  Rno-Mir-30-P2a  Sha-Mir-30-P2a  Spt-Mir-30-P2a  Sto-Mir-30-P2a  Tgu-Mir-30-P2a  Tni-Mir-30-P2a  Xla-Mir-30-P2a1  Xla-Mir-30-P2a2  Xtr-Mir-30-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(echTel2)		 JH980295: 6799925-6799983 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-30-P2a)		 Mir-30-P1a JH980295: 6797535-6797594 [+] UCSC
Mir-30-P2a JH980295: 6799925-6799983 [+] UCSC
Seed GUAAACA
Precursor
(pre-Mir +30nt flank)		 
GUGAGCAGAGCCCGGCCGAGUGUCCGCUCAUGUAAACAUCCUACACUCAGCUGUCGGGCACGGAGGGCUGGGAGGCGGAUGUUUACGUCAGCUGCCUCGGCAUGUCAGCCGGCCACGCA
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Structure
        10            20        30        40        50         
GUGAGCAGAGCCCGGCC----|  U  CC   C            UACA       GUCGGG 
                     GAG GU  GCU AUGUAAACAUCC    CUCAGCU      \
                     CUC CG  CGA UGCAUUUGUAGG    GGGUCGG      C
ACGCACCGGCCGACUGUACGG^  -  U-   C            CGGA       GAGGCA 
       110       100          90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Ete-Mir-30-P2a_5p
mirBase accessionNone
Sequence 
0- UGUAAACAUCCUACACUCAGCU -22
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Star sequence

Ete-Mir-30-P2a_3p*
mirBase accessionNone
Sequence 
37- CUGGGAGGCGGAUGUUUACGUC -59
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