MirGeneDB 3.0
61 Brachionus koreanus microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC To To To
Bko-Bantam None BANTAM GAGAUCA None None PJRA01000030.1 7050 7111 - Protostomia Protostomia Unknown 1 1
Bko-Let-7 None LET-7 GAGGUAG None None PJRA01000412.1 2263523 2263686 - Bilateria Bilateria No 1
Bko-Mir-1-P22 None MIR-1 GGAAUGU None None PJRA01000444.1 1523881 1523940 - Brachionus Bilateria No 1
Bko-Mir-1-P23a None MIR-1 GGAAUGU None None PJRA01000509.1 691716 691778 - B. koreanus Bilateria No 1
Bko-Mir-1-P23b None MIR-1 GGAAUGU None None PJRA01000428.1 739380 739442 - B. koreanus Bilateria No 1
Bko-Mir-7-P18a None MIR-7 GGAAGAC None None PJRA01000343.1 1094468 1094531 + B. koreanus Bilateria Unknown 1
Bko-Mir-7-P18b None MIR-7 GGAAGAC None None PJRA01000435.1 147438 147501 + B. koreanus Bilateria Unknown 1
Bko-Mir-7-P19a None MIR-7 GGAAGAC None None PJRA01000435.1 147548 147621 + B. koreanus Bilateria Unknown 1
Bko-Mir-7-P19b None MIR-7 GGAAGAC None None PJRA01000343.1 1094578 1094650 + B. koreanus Bilateria Unknown 1
Bko-Mir-8 None MIR-8 AAUACUG None None PJRA01000309.1 65124 65185 + Nephrozoa Nephrozoa Unknown
Bko-Mir-9 None MIR-9 UAAAGCU None None PJRA01000508.1 1072751 1072818 - Bilateria Bilateria No
Bko-Mir-10-P2 None MIR-10 ACCCGUA None None PJRA01000412.1 2263748 2263841 - Bilateria Eumetazoa No
Bko-Mir-10-P3 None MIR-10 CCCUGAG None None PJRA01000412.1 2263391 2263457 - Bilateria Eumetazoa No
Bko-Mir-10-P4o1 None MIR-10 AAGCUCG None None PJRA01000303.1 225428 225487 + B. koreanus Eumetazoa No
Bko-Mir-10-P4o2 None MIR-10 AAGCUCG None None PJRA01000412.1 2712167 2712226 + B. koreanus Eumetazoa No
Bko-Mir-12 None MIR-12 GAGUAUU None None PJRA01000114.1 1223532 1223592 - Protostomia Protostomia Unknown
Bko-Mir-22-P1 None MIR-22 GCUGCCU None None PJRA01000263.1 3983247 3983308 - Bilateria Bilateria Unknown
Bko-Mir-31-P21 None MIR-31 GGCAAGA None None PJRA01000011.1 798985 799044 - B. koreanus Bilateria No 1
Bko-Mir-31-P22 None MIR-31 GGCAAGA None None PJRA01000077.1 1300410 1300469 - B. koreanus Bilateria No 1
Bko-Mir-36-P16a None MIR-36 CACCGGG None None PJRA01000036.1 34094 34149 + B. koreanus Protostomia No
Bko-Mir-36-P16b None MIR-36 CACCGGG None None PJRA01000493.1 855453 855508 - B. koreanus Protostomia No
Bko-Mir-36-P18a None MIR-36 CACCGGG None None PJRA01000036.1 34336 34397 + B. koreanus Protostomia No
Bko-Mir-36-P18b None MIR-36 CACCGGG None None PJRA01000493.1 855209 855270 - B. koreanus Protostomia No
Bko-Mir-76 None MIR-76 UCGUUGU None None PJRA01000272.1 1617167 1617242 - Nephrozoa Nephrozoa No 1 1
Bko-Mir-87-o7 None MIR-87 UGAGCAA None None PJRA01000263.1 5959829 5959907 - Brachionus Protostomia No 1
Bko-Mir-96-P3 None MIR-96 AUGGCAC None None PJRA01000506.1 72757 72826 - Bilateria Bilateria Unknown
Bko-Mir-124 None MIR-124 GCAUUCA None None PJRA01000313.1 210830 210911 + Bilateria Bilateria Unknown 1
Bko-Mir-137 None MIR-137 UUAUUGC None None PJRA01000263.1 3970253 3970327 - Bilateria Bilateria Unknown 1
Bko-Mir-153 None MIR-153 UGCAUAG None None PJRA01000018.1 466848 466904 + Bilateria Bilateria No
Bko-Mir-184 None MIR-184 GGACGGA None None PJRA01000160.1 986264 986362 - Nephrozoa Nephrozoa No 1
Bko-Mir-190 None MIR-190 GAUAUGU None None PJRA01000263.1 5244684 5244762 - Bilateria Bilateria No
Bko-Mir-216-P2 None MIR-216 AAUCUCA None None PJRA01000114.1 1223645 1223709 - Nephrozoa Nephrozoa No
Bko-Mir-219 None MIR-219 GAUUGUC None None PJRA01000263.1 3082814 3082874 - Bilateria Bilateria Unknown 1
Bko-Mir-242 None MIR-242 UGCGUAG None None PJRA01000172.1 202468 202564 - Nephrozoa Nephrozoa No 1 1
Bko-Mir-277 None MIR-277 AAAUGCA None None PJRA01000048.1 2654569 2654636 - Protostomia Protostomia No
Bko-Mir-279-o1 None MIR-279 GACUAGA None None PJRA01000005.1 3913347 3913411 - Protostomia Protostomia No
Bko-Mir-279-o2 None MIR-279 GACUAGA None None PJRA01000503.1 192755 192815 - Protostomia Protostomia No 1
Bko-Mir-281 None MIR-281 GUCAUGG None None PJRA01000114.1 354482 354540 - Nephrozoa Nephrozoa No 1
Bko-Mir-315 None MIR-315 UUUGAUU None None PJRA01000314.1 47737 47796 - Nephrozoa Nephrozoa No
Bko-Mir-375 None MIR-375 UUGUUCG None None PJRA01000216.1 1979470 1979536 - Nephrozoa Nephrozoa No 1
Bko-Mir-750 None MIR-750 CAGAUCU None None PJRA01000453.1 780567 780641 - Protostomia Protostomia No
Bko-Mir-1175 None MIR-1175 GAGAUUC None None PJRA01000453.1 780411 780485 - Protostomia Protostomia No 1
Bko-Mir-1993 None MIR-1993 AUUAUGC None None PJRA01000353.1 622405 622474 + Protostomia Protostomia No 1
Bko-Mir-12593 None MIR-12593 CAUUCUC None None PJRA01000401.1 1138039 1138115 + Rotifera Rotifera No 1
Bko-Mir-12594 None MIR-12594 UAUCAGU None None PJRA01000412.1 1986186 1986255 - Rotifera Rotifera No 1
Bko-Mir-12595-P1 None MIR-12595 AUCUGAC None None PJRA01000198.1 741472 741539 - Brachionus Rotifera No 1
Bko-Mir-12595-P2 None MIR-12595 AUCUGAC None None PJRA01000257.1 2384 2444 + Brachionus Rotifera No
Bko-Mir-12596 None MIR-12596 AGAUGUA None None PJRA01000018.1 85106 85187 + Rotifera Rotifera No 1
Bko-Mir-12597 None MIR-12597 UGCACAA None None PJRA01000297.1 510024 510085 + Rotifera Rotifera No 1
Bko-Mir-12598-P1c None MIR-12598 ACUGUUU None None PJRA01000016.1 491571 491634 - B. koreanus Rotifera No 1
Bko-Mir-12598-P1d None MIR-12598 ACUGUUU None None PJRA01000016.1 494495 494558 - B. koreanus Rotifera No 1
Bko-Mir-12598-P2c None MIR-12598 CACUGUU None None PJRA01000016.1 491101 491164 - B. koreanus Rotifera Unknown 1
Bko-Mir-12598-P2d None MIR-12598 CACUGUU None None PJRA01000016.1 494024 494087 - B. koreanus Rotifera Unknown 1
Bko-Mir-12598-P3c None MIR-12598 ACUGUUU None None PJRA01000016.1 491223 491287 - B. koreanus Rotifera No 1 1
Bko-Mir-12598-P3d None MIR-12598 ACUGUUU None None PJRA01000016.1 494146 494210 - B. koreanus Rotifera No 1 1
Bko-Mir-12599-P1c None MIR-12599 ACUAAAA None None PJRA01000016.1 491459 491517 - B. koreanus Brachionus No
Bko-Mir-12599-P1d None MIR-12599 ACUAAAA None None PJRA01000016.1 494383 494441 - B. koreanus Brachionus No
Bko-Mir-12600 None MIR-12600 GACUAGG None None PJRA01000160.1 1160233 1160293 - Brachionus Brachionus No
Bko-Mir-12601-P1a None MIR-12601 AGGCCAU None None PJRA01000274.1 804124 804186 - B. koreanus Brachionus No 1
Bko-Mir-12601-P1b None MIR-12601 AGGCCAU None None PJRA01000313.1 3156736 3156798 + B. koreanus Brachionus No 1
Bko-Mir-12602 None MIR-12602 UUCACAA None None PJRA01000313.1 1985619 1985679 - Brachionus Brachionus No 1

(red - mature/co-mature, blue - star)

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