MirGeneDB 3.0
MirGeneDB ID

Bko-Mir-12597

Family name MIR-12597 (all species)
Species Monogonont Rotifer 2 (Brachionus koreanus)
MiRBase ID
Paralogues
Orthologues Ava-Mir-12597  Bpl-Mir-12597 
Node of Origin (locus) Rotifera
Node of Origin (family) Rotifera
Genome context
(Brachionus_koreanusGCA_016987375.1_Bk_v0.5.4_genomic)		 PJRA01000297.1: 510024-510085 [+] Ensembl
Seed UGCACAA
Precursor
(pre-Mir +30nt flank)		 
AAAAAAUAUUACACUUGAAAUCAAAUUUUAUUGCACAAUCUACAUUGGACCUUAGCAUUUGAGAACAGGUCUUUUGUAAAUUUGUGCAUGUAAAUUUUGACUGAAGCUCUUCCAUCGAAUCU
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Structure
        10        20          30         40         50         
AAAAAAUAUUACACUUGAAA--     U     -       UC-|   UU      UAGCAU 
                      UCAAA UUUAU UGCACAA   UACA  GGACCU      U
                      AGUUU AAAUG ACGUGUU   AUGU  UCUGGA      U
UCUAAGCUACCUUCUCGAAGUC     U     U       UAA^   UU      CAAGAG 
120       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
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Mature sequence

Bko-Mir-12597_5p
mirBase accessionNone
Sequence 
0- UUGCACAAUCUACAUUGGACCU -22
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Star sequence

Bko-Mir-12597_3p*
mirBase accessionNone
Sequence 
38- GUCUUUUGUAAAUUUGUGCAUGUA -62
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