MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-12597

Family name MIR-12597 (all species)
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues
Orthologues Bko-Mir-12597  Bpl-Mir-12597 
Node of Origin (locus) Rotifera
Node of Origin (family) Rotifera
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075495.1: 14276429-14276507 [-] Ensembl
Seed UGCACAA
Precursor
(pre-Mir +30nt flank)		 
AAAAUCAGAUCAUUAAUGCUGCUGAAGGUGUUGCACAAUCUAUAUGAGACCUUCUUUUUAUUUCAUGUGAUAUUGUGAAAAAUUAGGUCUUGUCUAGUUCUGUGCAUCAUGUUCGCUGCUAUAUACCUCGACGAAUUAU
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Structure
        10           20        30         40        50        60        
AAAAUCAGAUCAUUAAU---| U  U   G   U      AU-   U UG      UCUUUUUAUUUCAUG 
                    GC GC GAA GUG UGCACA   CUA A  AGACCU               U
                    CG CG CUU UAC ACGUGU   GAU U  UCUGGA               G
UAUUAAGCAGCUCCAUAUAU^ U  -   G   U      CUU   C GU      UUAAAAAGUGUUAUA 
       130       120        110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
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Mature sequence

Ava-Mir-12597_5p
mirBase accessionNone
Sequence 
0- UUGCACAAUCUAUAUGAGACCU -22
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Star sequence

Ava-Mir-12597_3p*
mirBase accessionNone
Sequence 
56- GUCUUGUCUAGUUCUGUGCAUCA -79
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