MirGeneDB 2.1

31 microRNA genes with seed GAACACA
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Bge-Mir-317 None MIR-317 GAACACA None None KZ615986.1 65403 65466 - Protostomia Protostomia No 1
Cte-Mir-317 cte-mir-317 MIR-317 GAACACA None MIMAT0009542 CAPTEscaffold_114 444019 444076 - Protostomia Protostomia No 1 1
Dan-Mir-317 dan-mir-317 MIR-317 GAACACA None MIMAT0008452 scaffold_13340 6480005 6480070 + Protostomia Protostomia No 1
Dma-Mir-317 None MIR-317 GAACACA None None NC_046180.1 8460499 8460565 + Protostomia Protostomia No
Dme-Mir-317 dme-mir-317 MIR-317 GAACACA MIMAT0020843 MIMAT0000409 3R 10091139 10091204 + Protostomia Protostomia No
Dmo-Mir-317 dmo-mir-317 MIR-317 GAACACA None MIMAT0008671 scaffold_6540 11898873 11898936 - Protostomia Protostomia No 1
Dpu-Mir-317 dpu-mir-317 MIR-317 GAACACA None MIMAT0012661 DAPPUscaffold_4 1243961 1244027 - Protostomia Protostomia No 1
Dsi-Mir-317 dsi-mir-317 MIR-317 GAACACA None MIMAT0008863 3R 15131551 15131616 - Protostomia Protostomia No
Dya-Mir-317 dya-mir-317 MIR-317 GAACACA None MIMAT0009055 3R 9963987 9964052 + Protostomia Protostomia No
Esc-Mir-317 None MIR-317 GAACACA None None Esc-Mir-317_pre_SRIE01001895.1:8487804-8487945 42 101 - Protostomia Protostomia No 1
Hme-Mir-317 None MIR-317 GAACACA None None HE667979 27841 27903 - Protostomia Protostomia No 1
Isc-Mir-317 isc-mir-317 MIR-317 GAACACA None MIMAT0012699 DS891538 57439 57502 - Protostomia Protostomia No 1 1
Lgi-Mir-317 lgi-mir-317 MIR-317 GAACACA None MIMAT0009597 LOTGIsca_10 851891 851951 + Protostomia Protostomia No 1
Npo-Mir-317 None MIR-317 GAACACA None None JACATO010000333.1 1089799 1089857 - Protostomia Protostomia Unknown 1 1
Obi-Mir-317 None MIR-317 GAACACA None None KQ416874 161473 161532 + Protostomia Protostomia No 1
Ovu-Mir-317 None MIR-317 GAACACA None None RXHP01053798.1 41967 42026 + Protostomia Protostomia No 1
Tca-Mir-317 tca-mir-317 MIR-317 GAACACA MIMAT0019130 MIMAT0008390 LG7 14490230 14490291 + Protostomia Protostomia No 1
Cgi-Mir-317-P1 None MIR-317 GAACACA None None scaffold622 468076 468134 + C. gigas Protostomia No 1
Cgi-Mir-317-P2 None MIR-317 GAACACA None None scaffold622 468583 468640 + C. gigas Protostomia No 1
Efe-Mir-317-P5 None MIR-317 GAACACA None None Efet.01.557472 631 689 + E. fetida Protostomia No 1
Efe-Mir-317-P6 None MIR-317 GAACACA None None Efet.01.212478 2808 2870 - E. fetida Protostomia No 1
Efe-Mir-317-P7 None MIR-317 GAACACA None None Efet.01.130990 1760 1827 + E. fetida Protostomia No 1
Aae-Mir-317-P8 aae-mir-317-1 MIR-317 GAACACA None MIMAT0014224 supercont1.265 429465 429527 + A. aegypti Protostomia No 1
Aae-Mir-317-P9 aae-mir-317-2 MIR-317 GAACACA None MIMAT0014224 supercont1.153 2154713 2154775 - A. aegypti Protostomia No 1
Lan-Mir-317-P10 None MIR-317 GAACACA None None LFEI01002950 930 993 + L. anatina Protostomia No 1
Lan-Mir-317-P11 None MIR-317 GAACACA None None LFEI01001564 14832 14895 - L. anatina Protostomia No 1
Lpo-Mir-317-P12 None MIR-317 GAACACA None None NW_013666266.1 394642 394701 + L. polyphemus Protostomia No 1
Lpo-Mir-317-P13 None MIR-317 GAACACA None None NW_013666308.1 203107 203166 + L. polyphemus Protostomia No 1
Csc-Mir-317-P17 None MIR-317 GAACACA None None NW_019384537.1 174576 174635 - C. sculpturatus Protostomia Unknown 1 1
Csc-Mir-317-P18 None MIR-317 GAACACA None None NW_019384483.1 602611 602681 - C. sculpturatus Protostomia Unknown 1 1
Xla-Novel-19 None XLA-NOVEL-19 GAACACA None None NC_030735.1 119656848 119656905 + X. laevis X. laevis No

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all