MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-317-P12

Family name MIR-317 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-317-P13 
Orthologues Aga-Mir-317  Agr-Mir-317  Bge-Mir-317  Cte-Mir-317  Dan-Mir-317  Dlo-Mir-317  Dma-Mir-317  Dme-Mir-317  Dmo-Mir-317  Dpu-Mir-317  Dsi-Mir-317  Dya-Mir-317  Eba-Mir-317  Esc-Mir-317  Gpa-Mir-317  Hme-Mir-317  Hru-Mir-317  Isc-Mir-317  Lgi-Mir-317  Lhy-Mir-317  Llo-Mir-317  Mom-Mir-317  Npo-Mir-317  Obi-Mir-317  Ofu-Mir-317  Ovu-Mir-317  Pau-Mir-317  Pca-Mir-317  Pdu-Mir-317  Pve-Mir-317  Rph-Mir-317  Snu-Mir-317  Tca-Mir-317  Tur-Mir-317  War-Mir-317 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013666266.1: 394642-394701 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-317-P12)		 Mir-317-P12 NW_013666266.1: 394642-394701 [+] Ensembl
Mir-277-P12 NW_013666266.1: 398631-398690 [+] Ensembl
Mir-34-P16 NW_013666266.1: 407611-407666 [+] Ensembl
Seed GAACACA
Precursor
(pre-Mir +30nt flank)		 
GAAAGCUCCGGAUGGAACUUGGGAGUAGGCCGAGUACCACGCUGGGUUCACAUGGGACAAGCUUGUGAACACAGCUGGUGGUAUCUCAGUGUAACCCCAAAAUGGACAUCACCUUACACC
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Structure
        10          20        30         40          50        
GAAAGCUCCGGAUGGAAC--     AG  G  C   -      --|   G       UGGGA 
                    UUGGG  UA GC GAG UACCAC  GCUG GUUCACA     \
                    AACCC  AU UG CUC AUGGUG  CGAC CAAGUGU     C
CCACAUUCCACUACAGGUAA     CA  G  A   U      GU^   A       UCGAA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ge Ge So So So To
Star sequence

Lpo-Mir-317-P12_5p*
mirBase accessionNone
Sequence 
0- CGAGUACCACGCUGGGUUCACA -22
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Mature sequence

Lpo-Mir-317-P12_3p
mirBase accessionNone
Sequence 
35- UGAACACAGCUGGUGGUAUCUCAGU -60
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