| MirGeneDB ID | Dgr-Mir-317-P4 |
|---|---|
| Family name | MIR-317 (all species) |
| Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
| MiRBase ID | |
| Paralogues | Dgr-Mir-317-P3 |
| Orthologues | Aga-Mir-317 Agr-Mir-317 Bge-Mir-317 Cte-Mir-317 Dan-Mir-317 Dlo-Mir-317 Dma-Mir-317 Dme-Mir-317 Dmo-Mir-317 Dpu-Mir-317 Dsi-Mir-317 Dya-Mir-317 Eba-Mir-317 Esc-Mir-317 Gpa-Mir-317 Hme-Mir-317 Hru-Mir-317 Isc-Mir-317 Lgi-Mir-317 Lhy-Mir-317 Llo-Mir-317 Mom-Mir-317 Npo-Mir-317 Obi-Mir-317 Ofu-Mir-317 Ovu-Mir-317 Pau-Mir-317 Pca-Mir-317 Pdu-Mir-317 Pve-Mir-317 Rph-Mir-317 Snu-Mir-317 Tca-Mir-317 Tur-Mir-317 War-Mir-317 |
| Node of Origin (locus) | D. gyrociliatus |
| Node of Origin (family) | Protostomia |
| Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000008.1: 874108-874170 [-] |
| Clustered miRNAs (< 50kb from Mir-317-P4) |
Mir-34-P22
CAJFCJ010000008.1: 873884-873945 [-]
Mir-277-P20 CAJFCJ010000008.1: 873975-874031 [-] Mir-317-P4 CAJFCJ010000008.1: 874108-874170 [-] |
| Seed | GAACACA |
| Precursor (pre-Mir +30nt flank) |
CUAUUUCCCUCUUUAUUGAGGAUUUGAGAACGGGAUGCUCAGCAGUGGUCACUCAAAAAUUUAGACAGUGAACACAGCUGGUGGUAUCUCUUUCUCAUUUUCUCCCUCUCAACAUUAAAUUGCGet precursor sequence |
| Structure | 10 20 30 40 50 CUAUUUCCCUCUUUAUU-- UU C --| A G CAAAAA GAGGA UGAGAA GGGAUGCU CAGC GUG UCACU \ CUCUU ACUCUU CUCUAUGG GUCG CAC AGUGA U CGUUAAAUUACAACUCUCC UU U UG^ A A CAGAUU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Star sequence | Dgr-Mir-317-P4_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CGGGAUGCUCAGCAGUGGUCACU -23
Get sequence
|
| Mature sequence | Dgr-Mir-317-P4_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- UGAACACAGCUGGUGGUAUCUCUUU -63
Get sequence
|
