| MirGeneDB ID | Dgr-Mir-34-P22 |
|---|---|
| Family name | MIR-34 (all species) |
| Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
| MiRBase ID | |
| Paralogues | Dgr-Mir-34-P21 |
| Orthologues | Aae-Mir-34 Aga-Mir-34 Agr-Mir-34 Asu-Mir-34 Bge-Mir-34 Cbr-Mir-34 Cel-Mir-34 Cin-Mir-34 Cte-Mir-34 Dan-Mir-34 Dlo-Mir-34 Dma-Mir-34 Dme-Mir-34 Dmo-Mir-34 Dpu-Mir-34 Dsi-Mir-34 Dya-Mir-34 Efe-Mir-34 Esc-Mir-34 Gpa-Mir-34 Gsp-Mir-34 Hmi-Mir-34 Hru-Mir-34 Isc-Mir-34 Lgi-Mir-34 Lhy-Mir-34 Llo-Mir-34 Mgi-Mir-34 Mom-Mir-34 Npo-Mir-34 Obi-Mir-34 Ofu-Mir-34 Ovu-Mir-34 Pau-Mir-34 Pca-Mir-34 Pdu-Mir-34 Pfl-Mir-34 Pmi-Mir-34 Pve-Mir-34 Rph-Mir-34 Sko-Mir-34 Snu-Mir-34 Spu-Mir-34 Tca-Mir-34 Tur-Mir-34 War-Mir-34 |
| Node of Origin (locus) | D. gyrociliatus |
| Node of Origin (family) | Bilateria |
| Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000008.1: 873884-873945 [-] |
| Clustered miRNAs (< 50kb from Mir-34-P22) |
Mir-34-P22
CAJFCJ010000008.1: 873884-873945 [-]
Mir-277-P20 CAJFCJ010000008.1: 873975-874031 [-] Mir-317-P4 CAJFCJ010000008.1: 874108-874170 [-] |
| Seed | GGCAGUG |
| Precursor (pre-Mir +30nt flank) |
AACUUAGUCAGGAGCGCUGGCCAGCUGCCAUGGCAGUGUGUUUAGCUGGUUGUAAAAAUUGUUUGUCAACAACCAGUGACGCCACUGGCCUGGAACCCGAGCCUUCUCGCGACCUAGCAAAAGet precursor sequence |
| Structure | 10 20 30 40 50 60 AACUUAGUCAGGAGCGCU- CAGCUG- U - -| UA AAAAAUU GGC CCA GG CAGU GUGUU GCUGGUUGU \ CCG GGU CC GUCA CGCAG UGACCAACA G AAAACGAUCCAGCGCUCUU AGCCCAA - G C^ -- ACUGUUU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Dgr-Mir-34-P22_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGGCAGUGUGUUUAGCUGGUUGU -23
Get sequence
|
| Star sequence | Dgr-Mir-34-P22_3p* (predicted) |
| mirBase accession | None |
| Sequence |
40- AACCAGUGACGCCACUGGCCUG -62
Get sequence
|
