MirGeneDB 2.1
MirGeneDB ID

Efe-Mir-317-P5

Family name MIR-317 (all species)
Seed GAACACA
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-317-P6  Efe-Mir-317-P7 
Orthologues Bge-Mir-317  Cte-Mir-317  Dan-Mir-317  Dma-Mir-317  Dme-Mir-317  Dmo-Mir-317  Dpu-Mir-317  Dsi-Mir-317  Dya-Mir-317  Esc-Mir-317  Hme-Mir-317  Isc-Mir-317  Lgi-Mir-317  Npo-Mir-317  Obi-Mir-317  Ovu-Mir-317  Tca-Mir-317 
Node of Origin (locus) E. fetida
Node of Origin (family) Protostomia
Genome context
(Efe_combined)		 Efet.01.557472: 631-689 [+]
Precursor
(pre-Mir +30nt flank)
UGGAAGAGAACGCCAACGCGUUAGAGGGCAGGGAAUCAGAGCUGUCUUCGCAUGCCACAGCGAGUGUGAACACAGCUGGUGAUAUCUCUUCCCUUUAUCGCUCAGUCAGCAUGCUGAUC
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Structure
        10         20        30          40        50        
UGGAAGAGAACGCCAAC-   U       C     -    G-|     C      UGCCA 
                  GCG UAGAGGG AGGGA AUCA  AGCUGU UUCGCA     C
                  CGC AUUUCCC UCUCU UAGU  UCGACA AAGUGU     A
CUAGUCGUACGACUGACU   U       U     A    GG^     C      GAGCG 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Efe-Mir-317-P5_5p*
mirBase accessionNone
Sequence 
0- GGGAAUCAGAGCUGUCUUCGCA -22
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Mature sequence

Efe-Mir-317-P5_3p
mirBase accessionNone
Sequence 
36- UGAACACAGCUGGUGAUAUCUCU -59
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