MirGeneDB 3.0
MirGeneDB ID

Aae-Mir-317-P9

Family name MIR-317 (all species)
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-317-2
Paralogues Aae-Mir-317-P8 
Orthologues Aga-Mir-317  Agr-Mir-317  Bge-Mir-317  Cte-Mir-317  Dan-Mir-317  Dlo-Mir-317  Dma-Mir-317  Dme-Mir-317  Dmo-Mir-317  Dpu-Mir-317  Dsi-Mir-317  Dya-Mir-317  Eba-Mir-317  Esc-Mir-317  Gpa-Mir-317  Hme-Mir-317  Hru-Mir-317  Isc-Mir-317  Lgi-Mir-317  Lhy-Mir-317  Llo-Mir-317  Mom-Mir-317  Npo-Mir-317  Obi-Mir-317  Ofu-Mir-317  Ovu-Mir-317  Pau-Mir-317  Pca-Mir-317  Pdu-Mir-317  Pve-Mir-317  Rph-Mir-317  Snu-Mir-317  Tca-Mir-317  Tur-Mir-317  War-Mir-317 
Node of Origin (locus) A. aegypti
Node of Origin (family) Protostomia
Genome context
(Aaeg_L3)		 supercont1.153: 2154713-2154775 [-] Ensembl
Seed GAACACA
Precursor
(pre-Mir +30nt flank)		 
AGCCCGGCGGUGUAGAGGAAUUUCGGCUACCGGGAUACACCCUGUGCUCGCUUUGCAUUCGAAACUAGUGAACACAGCUGGUGGUAUCUCAGUGGCCCUAAUCCGAUCGCAACCCUCCGCCGG
Get precursor sequence
Structure
        10        20          30         40          50         
AGCCCGGCGGUGUAGAGGAAUUUC--      C      -    --|    C     UUGCAU 
                          GGCUAC GGGAUA CACC  CUGUG UCGCU      U
                          CCGGUG CUCUAU GUGG  GACAC AGUGA      C
GGCCGCCUCCCAACGCUAGCCUAAUC      A      G    UC^    A     UCAAAG 
 120       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ge Ge So So To To To
Star sequence

Aae-Mir-317-P9_5p*
mirBase accessionNone
Sequence 
0- CGGGAUACACCCUGUGCUCGCU -22
Get sequence
Mature sequence

Aae-Mir-317-P9_3p
mirBase accessionMIMAT0014224
Sequence 
38- UGAACACAGCUGGUGGUAUCUCAGU -63
Get sequence