MirGeneDB 3.0

33 microRNA genes with seed UGUGACC
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Lan-Mir-2001-P4 None MIR-2001 UGUGACC None None LFEI01000195 453230 453288 - L. anatina Bilateria Unknown 1
Lan-Mir-2001-P3 None MIR-2001 UGUGACC None None LFEI01000174 377902 377960 + L. anatina Bilateria Unknown 1
Cte-Mir-2001 V cte-mir-2001 MIR-2001 UGUGACC MIMAT0009705 None CAPTEscaffold_296 188020 188081 + Bilateria Bilateria 2 No 1
Xbo-Mir-2001 None MIR-2001 UGUGACC None None scaffold836 44083 44141 - Bilateria Bilateria No
War-Mir-2001 None MIR-2001 UGUGACC None None WNLI01179893.1 684 742 - Bilateria Bilateria Unknown 1 1
Tur-Mir-2001 None MIR-2001 UGUGACC None None HE587309.1 1324887 1324960 + Bilateria Bilateria No 1
Sro-Mir-2001 None MIR-2001 UGUGACC None None JANVAR010000765.1 132488 132565 - Bilateria Bilateria No
Spu-Mir-2001 spu-mir-2001 MIR-2001 UGUGACC MIMAT0009740 None AAGJ06000015.1 468208 468268 + Bilateria Bilateria No 1
Snu-Mir-2001 None MIR-2001 UGUGACC None None CM049306.1 13254413 13254471 - Bilateria Bilateria Unknown 1 1
Sko-Mir-2001 sko-mir-2001 MIR-2001 UGUGACC MIMAT0009735 None NW_003126934.1 20664 20731 - Bilateria Bilateria Unknown 1
Pve-Mir-2001 None MIR-2001 UGUGACC None None Pve_Chr8 529343510 529343568 + Bilateria Bilateria Unknown 1 1
Pmi-Mir-2001 pmi-mir-2001 MIR-2001 UGUGACC MIMAT0032175 None JH782853.1 10000 10059 - Bilateria Bilateria No 1 1
Pfl-Mir-2001 None MIR-2001 UGUGACC None None LD368470.1 38645 38714 + Bilateria Bilateria No 1 1
Pdu-Mir-2001 None MIR-2001 UGUGACC None None JAPTHN010000005.1 66483700 66483753 - Bilateria Bilateria No 1 1
Pcr-Mir-2001 None MIR-2001 UGUGACC None None CAJQUW010000533.1 454272 454327 - Bilateria Bilateria No 1
Pau-Mir-2001 None MIR-2001 UGUGACC None None NMRA01000092.1 873567 873625 + Bilateria Bilateria Unknown 1
Ofu-Mir-2001 None MIR-2001 UGUGACC None None CAIIXF020000005.1 14833615 14833672 - Bilateria Bilateria No 1
Npo-Mir-2001 None MIR-2001 UGUGACC None None JACATO010000601.1 22889 22948 + Bilateria Bilateria Unknown 1 1
Mom-Mir-2001 None MIR-2001 UGUGACC None None JARFOD010132739.1 22313 22372 + Bilateria Bilateria Unknown
Lpo-Mir-2001 None MIR-2001 UGUGACC None None NW_013667319.1 181922 181978 - Bilateria Bilateria No 1
Llo-Mir-2001 None MIR-2001 UGUGACC None None OU342997.1 3150196 3150254 + Bilateria Bilateria Unknown
Lhy-Mir-2001 None MIR-2001 UGUGACC None None scaffold54055_14.9 1899 1958 - Bilateria Bilateria Unknown 1
Lgi-Mir-2001 lgi-mir-2001 MIR-2001 UGUGACC MIMAT0009731 None LOTGIsca_150 486301 486357 - Bilateria Bilateria Unknown 1
Isc-Mir-2001 isc-mir-2001 MIR-2001 UGUGACC MIMAT0009721 None NW_024609884.1 42500086 42500147 + Bilateria Bilateria No 1
Hru-Mir-2001 None MIR-2001 UGUGACC None None JALGQA010000012.1 1918026 1918084 - Bilateria Bilateria Unknown 1 1
Hmi-Mir-2001 None MIR-2001 UGUGACC None None SCFE01000006.1 3184949 3184999 + Bilateria Bilateria Unknown
Gsa-Mir-2001 gsa-mir-2001 MIR-2001 UGUGACC MIMAT0035280 MIMAT0035281 scf7180006951744 4739 4810 + Bilateria Bilateria No 1
Eba-Mir-2001 None MIR-2001 UGUGACC None None WURV02156569.1 3460 3519 + Bilateria Bilateria Unknown 1
Dgr-Mir-2001 None MIR-2001 UGUGACC None None CAJFCJ010000027.1 591034 591101 - Bilateria Bilateria Unknown 1
Csc-Mir-2001 None MIR-2001 UGUGACC None None NW_019384413.1 874212 874272 + Bilateria Bilateria No 1
Cel-Mir-2001 cel-mir-360 MIR-2001 UGUGACC MIMAT0015121 MIMAT0000702 chrX 5919174 5919235 + Bilateria Bilateria No
Cbr-Mir-2001 cbr-mir-360 MIR-2001 UGUGACC None MIMAT0001303 X 11259477 11259537 + Bilateria Bilateria No
Agr-Mir-2001 None MIR-2001 UGUGACC None None JABBOT010000001.1 47796802 47796859 - Bilateria Bilateria Unknown 1

(red - mature/co-mature, blue - star)

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