MirGeneDB 3.0
49 microRNA genes with seed GAACACA
Sort by genome coordinates Motifs
MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Xla-Novel-8 None XLA-NOVEL-8 GAACACA None None NC_030735.1 119656848 119656905 + X. laevis X. laevis No
Lpo-Mir-317-P13 None MIR-317 GAACACA None None NW_013666308.1 203107 203166 + L. polyphemus Protostomia No 1
Lpo-Mir-317-P12 None MIR-317 GAACACA None None NW_013666266.1 394642 394701 + L. polyphemus Protostomia No 1
Lan-Mir-317-P11 None MIR-317 GAACACA None None LFEI01001564 14832 14895 - L. anatina Protostomia No 1
Lan-Mir-317-P10 None MIR-317 GAACACA None None LFEI01002950 930 993 + L. anatina Protostomia No 1
Aae-Mir-317-P9 aae-mir-317-2 MIR-317 GAACACA None MIMAT0014224 supercont1.153 2154713 2154775 - A. aegypti Protostomia No 1
Aae-Mir-317-P8 aae-mir-317-1 MIR-317 GAACACA None MIMAT0014224 supercont1.265 429465 429527 + A. aegypti Protostomia No 1
Efe-Mir-317-P7 None MIR-317 GAACACA None None Efet.01.130990 1760 1827 + E. fetida Protostomia No 1
Efe-Mir-317-P6 None MIR-317 GAACACA None None Efet.01.212478 2808 2870 - E. fetida Protostomia No 1
Efe-Mir-317-P5 None MIR-317 GAACACA None None Efet.01.557472 631 689 + E. fetida Protostomia No 1
Dgr-Mir-317-P4 None MIR-317 GAACACA None None CAJFCJ010000008.1 874108 874170 - D. gyrociliatus Protostomia Unknown 1 1
Dgr-Mir-317-P3 None MIR-317 GAACACA None None CAJFCJ010000007.1 3991609 3991671 - D. gyrociliatus Protostomia Unknown 1 1
Mgi-Mir-317-P2 None MIR-317 GAACACA None None scaffold622 468583 468640 + C. gigas Protostomia No 1
Mgi-Mir-317-P1 None MIR-317 GAACACA None None scaffold622 468076 468134 + C. gigas Protostomia No 1
War-Mir-317 None MIR-317 GAACACA None None WNLI01164283.1 2971 3026 + Protostomia Protostomia Unknown 1
Tur-Mir-317 tur-mir-317 MIR-317 GAACACA MIMAT0023060 MIMAT0023061 HE587302.1 4474819 4474887 + Protostomia Protostomia No 1
Tca-Mir-317 tca-mir-317 MIR-317 GAACACA MIMAT0019130 MIMAT0008390 LG7 14490230 14490291 + Protostomia Protostomia No 1
Snu-Mir-317 None MIR-317 GAACACA None None CM049322.1 46119322 46119382 - Protostomia Protostomia No 1
Rph-Mir-317 None MIR-317 GAACACA None None CM018531.1 6746836 6746893 - Protostomia Protostomia No 1
Pve-Mir-317 None MIR-317 GAACACA None None Pve_Chr1 328172986 328173046 - Protostomia Protostomia No 1 1
Pdu-Mir-317 None MIR-317 GAACACA None None JAPTHN010000004.1 52017423 52017482 + Protostomia Protostomia No 1 1 1
Pca-Mir-317 None MIR-317 GAACACA None None AXZU02087541.1 259 320 + Protostomia Protostomia No 1
Pau-Mir-317 None MIR-317 GAACACA None None NMRA01001323.1 17350 17410 + Protostomia Protostomia Unknown 1 1
Ovu-Mir-317 None MIR-317 GAACACA None None RXHP01053798.1 41967 42026 + Protostomia Protostomia No 1
Ofu-Mir-317 None MIR-317 GAACACA None None CAIIXF020000010.1 35268805 35268865 - Protostomia Protostomia No 1 1 1
Obi-Mir-317 None MIR-317 GAACACA None None KQ416874 161473 161532 + Protostomia Protostomia No 1
Npo-Mir-317 None MIR-317 GAACACA None None JACATO010000333.1 1089799 1089857 - Protostomia Protostomia Unknown 1 1
Mom-Mir-317 None MIR-317 GAACACA None None JARFOD010083760.1 4793 4852 - Protostomia Protostomia No 1 1
Llo-Mir-317 None MIR-317 GAACACA None None OU343009.1 15441595 15441661 - Protostomia Protostomia No 1
Lhy-Mir-317 None MIR-317 GAACACA None None scaffold173124_34.9 5328 5386 - Protostomia Protostomia No 1
Lgi-Mir-317 lgi-mir-317 MIR-317 GAACACA None MIMAT0009597 LOTGIsca_10 851891 851951 + Protostomia Protostomia No 1
Isc-Mir-317 isc-mir-317 MIR-317 GAACACA None MIMAT0012699 NW_024609835.1 44980128 44980191 - Protostomia Protostomia No 1 1
Hru-Mir-317 None MIR-317 GAACACA None None JALGQA010000024.1 7998742 7998801 + Protostomia Protostomia No 1 1
Hme-Mir-317 None MIR-317 GAACACA None None HE667979 27841 27903 - Protostomia Protostomia No 1
Gpa-Mir-317 None MIR-317 GAACACA None None Scaffold190 146205 146290 + Protostomia Protostomia No
Esc-Mir-317 None MIR-317 GAACACA None None CM044492.1 83769329 83769388 - Protostomia Protostomia No 1
Eba-Mir-317 None MIR-317 GAACACA None None WURV02151074.1 2500 2556 - Protostomia Protostomia No 1
Dya-Mir-317 dya-mir-317 MIR-317 GAACACA None MIMAT0009055 3R 9963987 9964052 + Protostomia Protostomia No
Dsi-Mir-317 dsi-mir-317 MIR-317 GAACACA None MIMAT0008863 3R 15131551 15131616 - Protostomia Protostomia No
Dpu-Mir-317 dpu-mir-317 MIR-317 GAACACA None MIMAT0012661 DAPPUscaffold_4 1243961 1244027 - Protostomia Protostomia No 1
Dmo-Mir-317 dmo-mir-317 MIR-317 GAACACA None MIMAT0008671 scaffold_6540 11898873 11898936 - Protostomia Protostomia No 1
Dme-Mir-317 dme-mir-317 MIR-317 GAACACA MIMAT0020843 MIMAT0000409 3R 10091139 10091204 + Protostomia Protostomia No
Dma-Mir-317 None MIR-317 GAACACA None None NC_046180.1 8460499 8460565 + Protostomia Protostomia No
Dlo-Mir-317 None MIR-317 GAACACA None None NC_087236.1 5460303 5460368 + Protostomia Protostomia No 1
Dan-Mir-317 dan-mir-317 MIR-317 GAACACA None MIMAT0008452 scaffold_13340 6480005 6480070 + Protostomia Protostomia No 1
Cte-Mir-317 cte-mir-317 MIR-317 GAACACA None MIMAT0009542 CAPTEscaffold_114 444019 444076 - Protostomia Protostomia No 1 1
Bge-Mir-317 None MIR-317 GAACACA None None KZ615986.1 65403 65466 - Protostomia Protostomia No 1
Agr-Mir-317 None MIR-317 GAACACA None None JABBOT010000003.1 2841969 2842028 + Protostomia Protostomia No 1 1
Aga-Mir-317 aga-mir-317 MIR-317 GAACACA None MIMAT0001522 NC_064601.1 28097557 28097624 - Protostomia Protostomia No 1 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all