MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-194-P2a

Family name MIR-194 (all species)
Species African clawed frog (Xenopus laevis)
MiRBase ID xla-mir-194
Paralogues Xla-Mir-194-P2b  Xla-Mir-194-P4c  Xla-Mir-194-P4d 
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cja-Mir-194-P2  Cli-Mir-194-P2  Cmi-Mir-194-P2  Cpi-Mir-194-P2  Eca-Mir-194-P2  Ete-Mir-194-P2  Gga-Mir-194-P2  Gja-Mir-194-P2  Hsa-Mir-194-P2  Laf-Mir-194-P2  Lch-Mir-194-P2  Mml-Mir-194-P2  Mmr-Mir-194-P2  Mmu-Mir-194-P2  Mun-Mir-194-P2  Oan-Mir-194-P2  Ocu-Mir-194-P2  Pab-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tgu-Mir-194-P2  Xtr-Mir-194-P2 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030732.1: 14712976-14713030 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P2a)		 Mir-192-P2a NC_030732.1: 14711201-14711262 [-] UCSC Ensembl
Mir-194-P2a NC_030732.1: 14712976-14713030 [-] UCSC Ensembl
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
GGAGUUGAAGAGCCUGUAGUGUGUAUCAGGUGUAACAGCAACUCCAUGUGGACUUGUCCUUUUCCAGUGGAGAUGCUGUUACUUUUGAUGGACACUUACUAACCAGUGACAAGAG
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Structure
        10          20        30        40        50       
GGAGUUGAAGAGCCUGU--|    G       U         A      G    CUUG 
                   AGUGU UAUCAGG GUAACAGCA CUCCAU UGGA    U
                   UCACA GUAGUUU CAUUGUCGU GAGGUG ACCU    C
GAGAACAGUGACCAAUCAU^    G       U         A      -    UUUC 
   110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Em
Mature sequence

Xla-Mir-194-P2a_5p
mirBase accessionMIMAT0011141
Sequence 
0- UGUAACAGCAACUCCAUGUGGA -22
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Star sequence

Xla-Mir-194-P2a_3p*
mirBase accessionNone
Sequence 
34- CAGUGGAGAUGCUGUUACUUU -55
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