MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-194-P2

Family name MIR-194 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-194-P4 
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cja-Mir-194-P2  Cli-Mir-194-P2  Cmi-Mir-194-P2  Cpi-Mir-194-P2  Eca-Mir-194-P2  Gga-Mir-194-P2  Gja-Mir-194-P2  Hsa-Mir-194-P2  Laf-Mir-194-P2  Lch-Mir-194-P2  Mml-Mir-194-P2  Mmr-Mir-194-P2  Mmu-Mir-194-P2  Mun-Mir-194-P2  Oan-Mir-194-P2  Ocu-Mir-194-P2  Pab-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tgu-Mir-194-P2  Xla-Mir-194-P2a  Xla-Mir-194-P2b  Xtr-Mir-194-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(echTel2)		 JH980299: 49541869-49541925 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-194-P2)		 Mir-192-P2 JH980299: 49541581-49541640 [-] UCSC
Mir-194-P2 JH980299: 49541869-49541925 [-] UCSC
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
CUUAUGAUGGACUUGAUGGCGAUCAUCAAAUGUAACAGCAACUCCAUGUGGACUGUGUCUAAUUUCCAGUGGAGAUGCUGUUACUUUUGAUGCUUACCAACUUGCUACAAUAUAAAG
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Structure
        10          20        30        40        50        
CUUAUGAUGGACUUGAU--| CG U       U         A      G    CUGUG 
                   GG  A CAUCAAA GUAACAGCA CUCCAU UGGA     U
                   CC  U GUAGUUU CAUUGUCGU GAGGUG ACCU     C
GAAAUAUAACAUCGUUCAA^ AU C       U         A      -    UUAAU 
     110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
- +
To
Mature sequence

Ete-Mir-194-P2_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGAC -23
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Star sequence

Ete-Mir-194-P2_3p*
mirBase accessionNone
Sequence 
35- CCAGUGGAGAUGCUGUUACUUU -57
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