MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-194-P2

Family name MIR-194 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cja-Mir-194-P2  Cli-Mir-194-P2  Cpi-Mir-194-P2  Eca-Mir-194-P2  Ete-Mir-194-P2  Gga-Mir-194-P2  Gja-Mir-194-P2  Hsa-Mir-194-P2  Laf-Mir-194-P2  Lch-Mir-194-P2  Mml-Mir-194-P2  Mmr-Mir-194-P2  Mmu-Mir-194-P2  Mun-Mir-194-P2  Oan-Mir-194-P2  Ocu-Mir-194-P2  Pab-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tgu-Mir-194-P2  Xla-Mir-194-P2a  Xla-Mir-194-P2b  Xtr-Mir-194-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635979.1: 1871220-1871275 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P2)		 Mir-192-P2 KI635979.1: 1871038-1871097 [-] UCSC Ensembl
Mir-194-P2 KI635979.1: 1871220-1871275 [-] UCSC Ensembl
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
GCCAGACGGCAAACAGCAGUGUGCAUCAGGUGUAACAGCAACUCCAUGUGGAUGGCACUGGCUUCCAGUGGAGCUGCUGUUACUUUCGAUGGGCACUUACAUCAUAUCAAGGAUCC
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Structure
        10          20        30        40        50        
GCCAGACGGCAAACAGC--|    G    AG U         A      G    UGGCA 
                   AGUGU CAUC  G GUAACAGCA CUCCAU UGGA     \
                   UCACG GUAG  U CAUUGUCGU GAGGUG ACCU     C
CCUAGGAACUAUACUACAU^    G    CU U         C      -    UCGGU 
    110       100        90        80        70         60
Deep sequencing
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CommentThere is a second Dicer cut +1 on both arms.
3' NTU No
MotifsNo
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-194-P2_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGA -22
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Star sequence

Cmi-Mir-194-P2_3p*
mirBase accessionNone
Sequence 
35- CAGUGGAGCUGCUGUUACUUU -56
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