MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-194-P2

Family name MIR-194 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-194-P4 
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cli-Mir-194-P2  Cmi-Mir-194-P2  Cpi-Mir-194-P2  Eca-Mir-194-P2  Ete-Mir-194-P2  Gga-Mir-194-P2  Gja-Mir-194-P2  Hsa-Mir-194-P2  Laf-Mir-194-P2  Lch-Mir-194-P2  Mml-Mir-194-P2  Mmr-Mir-194-P2  Mmu-Mir-194-P2  Mun-Mir-194-P2  Oan-Mir-194-P2  Ocu-Mir-194-P2  Pab-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tgu-Mir-194-P2  Xla-Mir-194-P2a  Xla-Mir-194-P2b  Xtr-Mir-194-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021933.1: 4784038-4784095 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P2)		 Mir-192-P2 CM021933.1: 4783618-4783677 [-] UCSC Ensembl
Mir-194-P2 CM021933.1: 4784038-4784095 [-] UCSC Ensembl
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
UCUUCUUGUAUGUUUAAUGGUGUUAUCAAGUGUAACAGCAACUCCAUGUGGACCGUGUACCAAUUUCCAGUGGAGACGCUGUUACUUCUGAUGGUUACCAACUUGCUACAAUAUAAAA
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Structure
        10         20         30        40        50         
UCUUCUUGUAUGUUUAA-    -|UU    AGU        AA      G    CCGUGU 
                  UGGU G  AUCA   GUAACAGC  CUCCAU UGGA      \
                  ACCA U  UAGU   CAUUGUCG  GAGGUG ACCU      A
AAAAUAUAACAUCGUUCA    U^GG    CUU        CA      -    UUAACC 
      110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Cja-Mir-194-P2_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGA -22
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Star sequence

Cja-Mir-194-P2_3p* (predicted)
mirBase accessionNone
Sequence 
37- CAGUGGAGACGCUGUUACUUC -58
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