MirGeneDB 2.1
MirGeneDB ID

Gja-Mir-194-P2

Family name MIR-194 (all species)
Seed GUAACAG
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-194-P1 
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cpi-Mir-194-P2  Cpo-Mir-194-P2  Dno-Mir-194-P2  Dre-Mir-194-P2a  Dre-Mir-194-P2b  Ete-Mir-194-P2  Gmo-Mir-194-P2a  Gmo-Mir-194-P2b  Hsa-Mir-194-P2  Lch-Mir-194-P2  Loc-Mir-194-P2  Mal-Mir-194-P2a  Mal-Mir-194-P2b  Mml-Mir-194-P2  Mmu-Mir-194-P2  Mun-Mir-194-P2  Oan-Mir-194-P2  Ocu-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Sha-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tni-Mir-194-P2a  Tni-Mir-194-P2b  Xla-Mir-194-P2c  Xla-Mir-194-P2d  Xtr-Mir-194-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015165831.1: 1123408-1123465 [-]
Precursor
(pre-Mir +30nt flank)
UGCCCCUGCCCAGACUGGGUGCCUAUCAACUGUAACAGCAACUCCAUGUGGAAGCAUCAGUCCAUUCCAGUGGGGGGGCUGUUAUUUUGGAUGGGCACCUAAAAGGUGUUGGAGGGCA
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Structure
        10          20        30        40        50         
UGCCCCUGCCCAGACUG--|         AACU        AA      G     GCAUC 
                   GGUGCCUAUC    GUAACAGC  CUCCAU UGGAA     \
                   CCACGGGUAG    UAUUGUCG  GGGGUG ACCUU     A
ACGGGAGGUUGUGGAAAAU^         GUUU        GG      -     ACCUG 
      110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Gja-Mir-194-P2_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGAA -23
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Star sequence

Gja-Mir-194-P2_3p* (predicted)
mirBase accessionNone
Sequence 
36- CCAGUGGGGGGGCUGUUAUUUU -58
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