| MirGeneDB ID | Lch-Mir-194-P2 |
|---|---|
| Family name | MIR-194 (all species) |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | Lch-Mir-194-P4 |
| Orthologues | Aca-Mir-194-P2 Ami-Mir-194-P2 Bta-Mir-194-P2 Cfa-Mir-194-P2 Cja-Mir-194-P2 Cli-Mir-194-P2 Cmi-Mir-194-P2 Cpi-Mir-194-P2 Eca-Mir-194-P2 Ete-Mir-194-P2 Gga-Mir-194-P2 Gja-Mir-194-P2 Hsa-Mir-194-P2 Laf-Mir-194-P2 Mml-Mir-194-P2 Mmr-Mir-194-P2 Mmu-Mir-194-P2 Mun-Mir-194-P2 Oan-Mir-194-P2 Ocu-Mir-194-P2 Pab-Mir-194-P2 Pbv-Mir-194-P2 Rno-Mir-194-P2 Spt-Mir-194-P2 Sto-Mir-194-P2 Tgu-Mir-194-P2 Xla-Mir-194-P2a Xla-Mir-194-P2b Xtr-Mir-194-P2 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (LatCha1_add) |
JH127009.1: 786089-786144 [-] Ensembl |
| Clustered miRNAs (< 50kb from Mir-194-P2) |
Mir-192-P2
JH127009.1: 785039-785101 [-]
Ensembl
Mir-194-P2 JH127009.1: 786089-786144 [-] Ensembl |
| Seed | GUAACAG |
| Precursor (pre-Mir +30nt flank) |
ACCUUGGACCAGUCAGCAGUGUGCUUCAGGUGUAACAGCAACUCCAUGUGGAUGGCAAUGGCUUCCAGUGGAGCUGCUGUUACUUUUGAUGGGCACUAACAGAUUGAAGGAAGCAAGet precursor sequence |
| Structure | 10 20 30 40 50 ACCUUGGACCAGUCAGCAGU --| U A G UGGCA GUGCU UCAGG GUAACAGCA CUCCAU UGGA \ CACGG AGUUU CAUUGUCGU GAGGUG ACCU A AACGAAGGAAGUUAGACAAU GU^ U C - UCGGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Lch-Mir-194-P2_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGUAACAGCAACUCCAUGUGGAU -23
Get sequence
|
| Star sequence | Lch-Mir-194-P2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
34- CCAGUGGAGCUGCUGUUACUUU -56
Get sequence
|
