| MirGeneDB ID | Ocu-Mir-194-P2 |
|---|
| Family name |
MIR-194 (all species) |
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| Seed |
GUAACAG |
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| Species |
Rabbit (Oryctolagus cuniculus) |
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| MiRBase ID |
|
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| Paralogues |
Ocu-Mir-194-P1
|
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| Orthologues |
Aca-Mir-194-P2
Ami-Mir-194-P2
Bta-Mir-194-P2
Cfa-Mir-194-P2
Cpi-Mir-194-P2
Cpo-Mir-194-P2
Dno-Mir-194-P2
Dre-Mir-194-P2a
Dre-Mir-194-P2b
Ete-Mir-194-P2
Gja-Mir-194-P2
Gmo-Mir-194-P2a
Gmo-Mir-194-P2b
Hsa-Mir-194-P2
Lch-Mir-194-P2
Loc-Mir-194-P2
Mal-Mir-194-P2a
Mal-Mir-194-P2b
Mml-Mir-194-P2
Mmu-Mir-194-P2
Mun-Mir-194-P2
Oan-Mir-194-P2
Pbv-Mir-194-P2
Rno-Mir-194-P2
Sha-Mir-194-P2
Spt-Mir-194-P2
Sto-Mir-194-P2
Tni-Mir-194-P2a
Tni-Mir-194-P2b
Xla-Mir-194-P2c
Xla-Mir-194-P2d
Xtr-Mir-194-P2
|
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| Node of Origin (locus) |
Vertebrata
|
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| Node of Origin (family) |
Vertebrata
|
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Genome context
(oryCun2_add) |
Ocu-Mir-194-P1_pre_CM023772.1:234556212-234556357: 46-101 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
ACCCCAGGCCUCCGGUUGGCUCCCACCCCCUGUAACAGCAACUCCAUGUGGAAUGCCCGUCUUUCCAGUGGGGCUGCUGUUAUCCGGGGCGGGCGCCGGUACCCACGGAGAAGAGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACCCCAGGCCUCCGGUU--| U A CU A G UGCC
GGC CCC CCCC GUAACAGCA CUCCAU UGGAA \
CCG GGG GGGG UAUUGUCGU GGGGUG ACCUU C
GGAGAAGAGGCACCCAUGG^ C C CC C - UCUG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Ocu-Mir-194-P2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGUAACAGCAACUCCAUGUGGAA -23
Get sequence
|
|---|
| Star sequence |
Ocu-Mir-194-P2_3p* |
| mirBase accession | None |
|---|
| Sequence |
34- CCAGUGGGGCUGCUGUUAUCCG -56
Get sequence
|
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