MirGeneDB 3.0

MirGeneDB ID

Mml-Mir-194-P2

Family name MIR-194 (all species)
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-194-1
Paralogues Mml-Mir-194-P4 
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cja-Mir-194-P2  Cli-Mir-194-P2  Cmi-Mir-194-P2  Cpi-Mir-194-P2  Eca-Mir-194-P2  Ete-Mir-194-P2  Gga-Mir-194-P2  Gja-Mir-194-P2  Hsa-Mir-194-P2  Laf-Mir-194-P2  Lch-Mir-194-P2  Mmr-Mir-194-P2  Mmu-Mir-194-P2  Mun-Mir-194-P2  Oan-Mir-194-P2  Ocu-Mir-194-P2  Pab-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tgu-Mir-194-P2  Xla-Mir-194-P2a  Xla-Mir-194-P2b  Xtr-Mir-194-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_003339765.3_Mmul_10_traces)
CM014336.1: 77683104-77683161 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P2)
Mir-192-P2 CM014336.1: 77682808-77682867 [-] UCSC Ensembl
Mir-194-P2 CM014336.1: 77683104-77683161 [-] UCSC Ensembl
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)
UCUCCUUAUAUGUUUAAUGGUGUUAUCAAGUGUAACAGCAACUCCAUGUGGACUGUGUACCAAUUUCCAGUGGAGAUGCUGUUACUUUUGAUGGUUACCAACUUGACACAAUAUAAAG
Get precursor sequence
Structure
        10         20         30        40        50         
UCUCCUUAUAUGUUUAA-    -|UU      U         A      G    CUGUGU 
                  UGGU G  AUCAAG GUAACAGCA CUCCAU UGGA      \
                  ACCA U  UAGUUU CAUUGUCGU GAGGUG ACCU      A
GAAAUAUAACACAGUUCA    U^GG      U         A      -    UUAACC 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-194-P2_5p

mirBase accessionMIMAT0002727
Sequence
0- UGUAACAGCAACUCCAUGUGGA -22
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Proposed targets TargetScanVert: mml-miR-194-5p
Star sequence

Mml-Mir-194-P2_3p*

mirBase accessionNone
Sequence
36- CCAGUGGAGAUGCUGUUACUUU -58
Get sequence