MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-194-P2b

Family name MIR-194 (all species)
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-194-P2a  Xla-Mir-194-P4c  Xla-Mir-194-P4d 
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cja-Mir-194-P2  Cli-Mir-194-P2  Cmi-Mir-194-P2  Cpi-Mir-194-P2  Eca-Mir-194-P2  Ete-Mir-194-P2  Gga-Mir-194-P2  Gja-Mir-194-P2  Hsa-Mir-194-P2  Laf-Mir-194-P2  Lch-Mir-194-P2  Mml-Mir-194-P2  Mmr-Mir-194-P2  Mmu-Mir-194-P2  Mun-Mir-194-P2  Oan-Mir-194-P2  Ocu-Mir-194-P2  Pab-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tgu-Mir-194-P2  Xtr-Mir-194-P2 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030733.1: 14167694-14167749 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P2b)		 Mir-194-P2b NC_030733.1: 14167694-14167749 [+] UCSC Ensembl
Mir-192-P2b NC_030733.1: 14168868-14168929 [+] UCSC Ensembl
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
GGAGUAGAAGAGCCUGUAGUGUGUAUCAGGUGUAACAGCAACUCCAUGUGGACUUGUCCGUAUUCCAGUGGAGAUGCUGUUACUUUUGAUGGGCACUUACUGACCAGUGACAAGAG
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Structure
        10          20        30        40        50        
GGAGUAGAAGAGCCUGU--|    G       U         A      G    CUUGU 
                   AGUGU UAUCAGG GUAACAGCA CUCCAU UGGA     \
                   UCACG GUAGUUU CAUUGUCGU GAGGUG ACCU     C
GAGAACAGUGACCAGUCAU^    G       U         A      -    UAUGC 
    110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Em
Mature sequence

Xla-Mir-194-P2b_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGA -22
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Star sequence

Xla-Mir-194-P2b_3p*
mirBase accessionNone
Sequence 
35- CAGUGGAGAUGCUGUUACUUU -56
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