MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-194-P4

Family name MIR-194 (all species)
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-194-P2 
Orthologues Aca-Mir-194-P4  Ami-Mir-194-P4  Bta-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dno-Mir-194-P4  Dre-Mir-194-P4a  Dre-Mir-194-P4b  Eca-Mir-194-P4  Ete-Mir-194-P4  Gmo-Mir-194-P4a  Gmo-Mir-194-P4b  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mal-Mir-194-P4a  Mal-Mir-194-P4b  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Mun-Mir-194-P4  Neu-Mir-194-P4  Oan-Mir-194-P4  Ocu-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Sha-Mir-194-P4  Spt-Mir-194-P4  Sto-Mir-194-P4  Tni-Mir-194-P4a  Tni-Mir-194-P4b  Xla-Mir-194-P4c  Xla-Mir-194-P4d  Xtr-Mir-194-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015165831.1: 1123408-1123465 [-]
Clustered miRNAs
(< 50kb from Mir-194-P4)		 Mir-192-P4 NW_015165831.1: 1121834-1121897 [-]
Mir-194-P4 NW_015165831.1: 1123408-1123465 [-]
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
UGCCCCUGCCCAGACUGGGUGCCUAUCAACUGUAACAGCAACUCCAUGUGGAAGCAUCAGUCCAUUCCAGUGGGGGGGCUGUUAUUUUGGAUGGGCACCUAAAAGGUGUUGGAGGGCA
Get precursor sequence
Structure
        10          20        30        40        50         
UGCCCCUGCCCAGACUG--|         AACU        AA      G     GCAUC 
                   GGUGCCUAUC    GUAACAGC  CUCCAU UGGAA     \
                   CCACGGGUAG    UAUUGUCG  GGGGUG ACCUU     A
ACGGGAGGUUGUGGAAAAU^         GUUU        GG      -     ACCUG 
      110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Mature sequence

Gja-Mir-194-P4_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGAA -23
Get sequence
Star sequence

Gja-Mir-194-P4_3p* (predicted)
mirBase accessionNone
Sequence 
36- CCAGUGGGGGGGCUGUUAUUUU -58
Get sequence