MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-194-P4

Family name MIR-194 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-194-P4  Ami-Mir-194-P4  Bta-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dno-Mir-194-P4  Dre-Mir-194-P4a  Dre-Mir-194-P4b  Eca-Mir-194-P4  Ete-Mir-194-P4  Gja-Mir-194-P4  Gmo-Mir-194-P4a  Gmo-Mir-194-P4b  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mal-Mir-194-P4a  Mal-Mir-194-P4b  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Mun-Mir-194-P4  Oan-Mir-194-P4  Ocu-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Sha-Mir-194-P4  Spt-Mir-194-P4  Sto-Mir-194-P4  Tni-Mir-194-P4a  Tni-Mir-194-P4b  Xla-Mir-194-P4c  Xla-Mir-194-P4d  Xtr-Mir-194-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051814.1: 17669901-17669958 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P4)		 Mir-192-P4 CM051814.1: 17669676-17669739 [-] UCSC Ensembl
Mir-194-P4 CM051814.1: 17669901-17669958 [-] UCSC Ensembl
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
AGGAGGGCAGCUGUGGUGGCGCUCACUCCCUGUAACAGCAACUCCAUGUGGGACAGCUUCCUGCUUCCAGUGGGGGUGCUGUUACCUUGGGUGGGCAGCCGAGAUCACCUGCCGGAGA
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Structure
        10         20         30        40        50         
AGGAGGGCAGCUGUGGU-   -|       CCU         A      G    ACAGCU 
                  GGC GCUCACUC   GUAACAGCA CUCCAU UGGG      \
                  CCG CGGGUGGG   CAUUGUCGU GGGGUG ACCU      U
AGAGGCCGUCCACUAGAG   A^       UUC         G      -    UCGUCC 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-194-P4_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGGA -23
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Star sequence

Neu-Mir-194-P4_3p*
mirBase accessionNone
Sequence 
36- CCAGUGGGGGUGCUGUUACCUU -58
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