MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-194-P4a

Family name MIR-194 (all species)
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-194b
Paralogues Dre-Mir-194-P4b 
Orthologues Aca-Mir-194-P4  Ami-Mir-194-P4  Bta-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dno-Mir-194-P4  Eca-Mir-194-P4  Ete-Mir-194-P4  Gja-Mir-194-P4  Gmo-Mir-194-P4a  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mal-Mir-194-P4a  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Mun-Mir-194-P4  Neu-Mir-194-P4  Oan-Mir-194-P4  Ocu-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Sha-Mir-194-P4  Spt-Mir-194-P4  Sto-Mir-194-P4  Tni-Mir-194-P4a  Xtr-Mir-194-P4 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 LKPD01021295.1: 6148-6206 [-] UCSC Ensembl
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
GGACGUUGGACAUUGUUGGUGCUCGCUGGGUGUAACAGCCGCUCCAUGUGGAAAAUGCAUUCAAGUGCCCAUGGAGAAGCUGUUACCUGCAGAGAGUCACAUGUGACGGAAACCGGAUG
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Structure
        10         20          30        40        50         
GGACGUUGGACAUUGUUG-   -   G   -| U        CG       U  AAAAUGC 
                   GUG CUC CUG GG GUAACAGC  CUCCAUG GG       A
                   CAC GAG GAC UC CAUUGUCG  GAGGUAC CC       U
GUAGGCCAAAGGCAGUGUA   U   A   G^ -        AA       -  GUGAACU 
       110       100        90         80        70         60
Deep sequencing
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CommentNot in assembly but in trace archives.
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-194-P4a_5p
mirBase accessionMIMAT0001859
Sequence 
0- UGUAACAGCCGCUCCAUGUGGAA -23
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Proposed targets TargetScanFish: dre-miR-194b
Star sequence

Dre-Mir-194-P4a_3p*
mirBase accessionNone
Sequence 
37- CCCAUGGAGAAGCUGUUACCUG -59
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