MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-194-P4

Family name MIR-194 (all species)
Species Horse (Equus caballus)
MiRBase ID eca-mir-194-1
Paralogues Eca-Mir-194-P2 
Orthologues Aca-Mir-194-P4  Ami-Mir-194-P4  Bta-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dno-Mir-194-P4  Dre-Mir-194-P4a  Dre-Mir-194-P4b  Ete-Mir-194-P4  Gja-Mir-194-P4  Gmo-Mir-194-P4a  Gmo-Mir-194-P4b  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mal-Mir-194-P4a  Mal-Mir-194-P4b  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Mun-Mir-194-P4  Neu-Mir-194-P4  Oan-Mir-194-P4  Ocu-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Sha-Mir-194-P4  Spt-Mir-194-P4  Sto-Mir-194-P4  Tni-Mir-194-P4a  Tni-Mir-194-P4b  Xla-Mir-194-P4c  Xla-Mir-194-P4d  Xtr-Mir-194-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009159.1: 28723280-28723337 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P4)		 Mir-192-P4 CM009159.1: 28723073-28723136 [-] UCSC Ensembl
Mir-194-P4 CM009159.1: 28723280-28723337 [-] UCSC Ensembl
Novel-5 CM009159.1: 28760007-28760071 [+] UCSC Ensembl
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
GGCCCAGGCCUCCAGUGGGCUCCCACCCCCUGUAACAGCAACUCCAUGUGGAAGUGCCCACUGGUUCCAGUGGGGCUGCUGUUAUCUGGGGCGGGGGCCAGGGUCUACGCAGGAGGAG
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Structure
        10          20        30        40        50         
GGCCCAGGCCUCCAGUG--|      A    CU         A      G     GUGCC 
                   GGCUCCC CCCC  GUAACAGCA CUCCAU UGGAA     \
                   CCGGGGG GGGG  UAUUGUCGU GGGGUG ACCUU     C
GAGGAGGACGCAUCUGGGA^      C    UC         C      -     GGUCA 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-194-P4_5p
mirBase accessionMIMAT0013050
Sequence 
0- UGUAACAGCAACUCCAUGUGGAA -23
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Star sequence

Eca-Mir-194-P4_3p*
mirBase accessionNone
Sequence 
36- CCAGUGGGGCUGCUGUUAUCUG -58
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