MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-194-P4a

Family name MIR-194 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-194-P4b 
Orthologues Aca-Mir-194-P4  Ami-Mir-194-P4  Bta-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dno-Mir-194-P4  Dre-Mir-194-P4a  Eca-Mir-194-P4  Ete-Mir-194-P4  Gja-Mir-194-P4  Gmo-Mir-194-P4a  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Mun-Mir-194-P4  Neu-Mir-194-P4  Oan-Mir-194-P4  Ocu-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Sha-Mir-194-P4  Spt-Mir-194-P4  Sto-Mir-194-P4  Tni-Mir-194-P4a  Xtr-Mir-194-P4 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884690.1: 6628904-6628960 [+] UCSC Ensembl
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
AGCUGUGUUGUUCCUGUGGGUCUCACCAGCUGUAACAGCAUCUCCAUUUGGAAGAACUCUGGCCUCCAGUGGAGAUGCUGUUAUCUGUGGAGGGACACCUCUUGUCAUCAAAAAGUU
Get precursor sequence
Structure
        10          20        30        40        50        
AGCUGUGUUGUUCCUGU-  -|    A   GCU                 U   AGAAC 
                  GG GUCUC CCA   GUAACAGCAUCUCCAUU GGA     U
                  CC CAGGG GGU   UAUUGUCGUAGAGGUGA CCU     C
UUGAAAAACUACUGUUCU  A^    A   GUC                 -   CCGGU 
     110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-194-P4a_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAUCUCCAUUUGGAA -23
Get sequence
Star sequence

Mal-Mir-194-P4a_3p*
mirBase accessionNone
Sequence 
35- CCAGUGGAGAUGCUGUUAUCUG -57
Get sequence