MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-194-P4b

Family name MIR-194 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-194-P4a 
Orthologues Aca-Mir-194-P4  Ami-Mir-194-P4  Bta-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dno-Mir-194-P4  Dre-Mir-194-P4b  Eca-Mir-194-P4  Ete-Mir-194-P4  Gja-Mir-194-P4  Gmo-Mir-194-P4b  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Mun-Mir-194-P4  Neu-Mir-194-P4  Oan-Mir-194-P4  Ocu-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Sha-Mir-194-P4  Spt-Mir-194-P4  Sto-Mir-194-P4  Tni-Mir-194-P4b  Xtr-Mir-194-P4 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884735.1: 1355510-1355566 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P4b)		 Mir-192-P4b KV884735.1: 1355299-1355359 [-] UCSC Ensembl
Mir-194-P4b KV884735.1: 1355510-1355566 [-] UCSC Ensembl
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
UCACUGAUGAGCCUUCUGGUGCUUGCUGGCUGUAACAGCAACUCCAUGUGGAAUCUCUGCUUGUUCCAGUGGAAGUGCUGUUACCUGCAGAGAGCUGCCAAACUCAAGUGAAGCCGC
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Structure
        10         20         30         40        50        
UCACUGAUGAGCCUUCU-   -|  UG   G U-         AC     G     UCUC 
                  GGU GCU  CUG C  GUAACAGCA  UCCAU UGGAA    U
                  CCG CGA  GAC G  CAUUGUCGU  AGGUG ACCUU    G
CGCCGAAGUGAACUCAAA   U^  GA   - UC         GA     -     GUUC 
     110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-194-P4b_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGAA -23
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Star sequence

Mal-Mir-194-P4b_3p*
mirBase accessionNone
Sequence 
35- CCAGUGGAAGUGCUGUUACCUG -57
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